Pairwise Alignments
Query, 1158 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS
Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440
Score = 622 bits (1603), Expect = 0.0
Identities = 332/820 (40%), Positives = 502/820 (61%), Gaps = 23/820 (2%)
Query: 346 LLLDELGQARDDLGSRIAEME--SIFDASPVVIGVVR--DRCLIQANRAFERLFGVSLET 401
L++D R + R++E + S+F P ++ + R D CL++ N AFE G+ +
Sbjct: 418 LMIDISETKRTEDALRLSEQKFASVFQQCPDILLIARHSDGCLLEVNEAFEEQIGLPPDQ 477
Query: 402 ALGQTVVGYYPTPEEFADFGQQLYPAVADGRVAHFLRRFRRADGTLFWANFYARQIDAQQ 461
+G+T E + G L + G + + FRR++G LF A +
Sbjct: 478 VIGRTATDLDLWGVEGS--GPLLLERLHQGGIRNLEMSFRRSNGQLFTGLTSAETFELDG 535
Query: 462 PQRGIIIVIEDVDQARHQEEVLRESEERYRQMFENNTSIKLLIDAGDGAIVDANPAAADF 521
+++ + D+ Q + ++ L+ SEE++ + F + LL DG +++ N
Sbjct: 536 TP-ALVVAVRDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRL 594
Query: 522 YGYPLDTLRRMNIAQLNQLSVE-----EVRAEMALADQQQR----RYFNFRHRLASGEVR 572
GY L+ ++Q S++ ++ L DQ R R F R + G++R
Sbjct: 595 TGYDLNPT-------IDQTSLDLGIWVDLNERKRLVDQLNRDGFVRDFTCHIRRSDGQIR 647
Query: 573 EVEVHSGPVLLRGRRLLYSIIHDITARRRAEEQLRLSAKVFEGASEGIVICDRNNRIMSV 632
E+ + P+ + G + +I DIT R +E+L+L+A VFE +EG++I D + RI +V
Sbjct: 648 LCELSARPLPITGVDCMLTIARDITERHLMQEKLQLAATVFENTAEGVLITDIDQRISAV 707
Query: 633 NRAFVEITGYAEAEVQGRDPRVLNSGRHDAAFFANLWHHLKTAGTWQGEIWNRRKGGEVY 692
NRAF EITGY+E E G+ PR+L SG+HD+AF+ +WH L G WQGEI+N+RK GE+Y
Sbjct: 708 NRAFSEITGYSEIEALGQTPRLLASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGELY 767
Query: 693 PEWLSITTVRDEAGEVSNYVAVFADVSERKRNEEHIRFLAEHDYLTGLPNRSLLHDRLQQ 752
P WL+I+ VR+ E++++VAVFAD+S K + + + A HD LTGLPNR+L +RLQ
Sbjct: 768 PSWLTISAVRNSDREITHFVAVFADISSIKHAQAKLDYQAHHDPLTGLPNRTLFENRLQG 827
Query: 753 AIALAERNSESLALMFIDLDRFKNINDSLGHQVGDQLLQEVGRRIQACVRSADTVSRPGG 812
+ A+ ++ A++F+DLDRFK+INDSLGH VGD LL+ + +R++ VR DTV+R GG
Sbjct: 828 VLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGG 887
Query: 813 DEFIILLPSIETPQDAARVAEKLLESLNRPYQLGGHELVITASIGIAVFPEDGRDFQTLV 872
DEFIILLP + P DA+ +A KLL N P+Q G HE +ASIGI+++P+DG D TL+
Sbjct: 888 DEFIILLPGLHKPSDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDGTDVSTLI 947
Query: 873 KNADAAMYYSKEAGRDSFHFFTPDMNARVFERLSLENSLRRALERQEFLLYYQPQVDMPS 932
+NADAAMY SK GR+ +T D+ A+ ER++LE+ LRRA+ER E L +QP++ + +
Sbjct: 948 RNADAAMYRSKAKGRNRVEAYTRDLTAQASERIALEHELRRAVERNEMSLCFQPKLSLKT 1007
Query: 933 GRVIGFEALIRWQHPQMGLVSPARFIPVAEDSGLIVPIGEWVLGEACRQNRAWQEQGMPA 992
++G EALIRW HP G V P FI +AE++G I+ +G+WVL +ACRQ +AW++ P
Sbjct: 1008 QSLVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQMQAWKQHYQPF 1067
Query: 993 VPVAVNISALQFRQPQFEASVERALAESGLEPAWLELELTESMMLHQGQGATDLLDRLKA 1052
P+++N++ Q R P +E+ L L+ L+LE+TE+ ++ Q + A +L +LK
Sbjct: 1068 GPLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEEALAVLYQLKK 1127
Query: 1053 RGVRLSIDDFGTGYSSLAYLKRLPLDKLKIDQAFVRDIASDAGGAAITATIIQMAHNLGL 1112
GV+L+IDDFGTGYSSL+YLKRLPLD LKID++F+R + D AAI II + ++ L
Sbjct: 1128 LGVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARAIIALGRSMQL 1187
Query: 1113 SVIAEGVETEAQLEFLQAHDCASAQGFYFARPMPAADIRA 1152
++IAEGVE +AQ FL A C QG+ + P+P + A
Sbjct: 1188 TIIAEGVENQAQQRFLAAEGCEQIQGYIVSLPLPPEEFAA 1227
Score = 52.4 bits (124), Expect = 2e-10
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 13/259 (5%)
Query: 480 EEVLRESEERYRQMFENNTSIKLLIDAGDGAIVDANPAAADFYGYPLDTLRRMNIAQLNQ 539
E+ LR SE YR + E+ ++I DA D +P A D GYPL R + +
Sbjct: 303 EQELRSSEYHYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGYPLSDWLRPGFWR-SI 361
Query: 540 LSVEEVRAEMALADQQ----QRRYFNFRHRLASGEVREVEVHSGPVLLRGRRLLYSIIHD 595
L E+ A D + + ++R A G+ V + + ++ ++ D
Sbjct: 362 LHPEDALWAQAYCDSETAAGRDHSLDYRVIRADGQPLWVRNIVSMIEHGHQPVMRGLMID 421
Query: 596 ITARRRAEEQLRLS----AKVFEGASEGIVICDRNNR-IMSVNRAFVEITGYAEAEVQGR 650
I+ +R E+ LRLS A VF+ + ++I ++ ++ VN AF E G +V GR
Sbjct: 422 ISETKRTEDALRLSEQKFASVFQQCPDILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGR 481
Query: 651 DPRVLNSGRHDAAFFANLWHHLKTAGTWQGEIWNRRKGGEVYPEWLSITTVRDEAGEVSN 710
L+ + + L L G E+ RR G+++ S T E
Sbjct: 482 TATDLDLWGVEGS-GPLLLERLHQGGIRNLEMSFRRSNGQLFTGLTSAETF--ELDGTPA 538
Query: 711 YVAVFADVSERKRNEEHIR 729
V D+S+ K ++ ++
Sbjct: 539 LVVAVRDISQLKETQQQLQ 557