Pairwise Alignments

Query, 1320 a.a., ATP-dependent helicase HrpA from Dechlorosoma suillum PS

Subject, 828 a.a., helicase from Agrobacterium fabrum C58

 Score =  276 bits (707), Expect = 4e-78
 Identities = 174/495 (35%), Positives = 271/495 (54%), Gaps = 21/495 (4%)

Query: 74  RLPKPEYAE--DLPVNGRREEIKALIEHNQVVIVCGETGSGKTTQLPKICLELGRGAAGL 131
           R P P   E  +LPV+    +I  ++   +  ++    G+GKTT +P   L       G 
Sbjct: 3   RTPVPIKTELPELPVSAVLGDIAQVLAAKKRAVLSAPPGAGKTTLVPLRLLHEDWRGDGK 62

Query: 132 IGHTQPRRLAARSVAARVAQELQTQIGAGVGVKIRFQDRSGPQSYLKLMTDGILLAETQT 191
           I   +PRRLAAR+ A R+A+ L+  +G  VG ++R  +R   ++ ++++T+G+       
Sbjct: 63  IILLEPRRLAARAAAGRMAELLRENVGETVGYRMRLDNRVSSKTRIEVVTEGVFARMVLD 122

Query: 192 DPYLNAYDTIIIDEAHERSLNIDFLLGYLKQLLAK-RKDLKVIITSATIDAERFAQHFAQ 250
           DP L+   T+I DE HERSL+ DF L     + A  R+DL++++ SAT+D ER       
Sbjct: 123 DPELSGVSTVIFDEFHERSLDGDFGLALALDVQAGLREDLRILVMSATLDVERIGALMGD 182

Query: 251 HGKPAPVIEVSGRLYPVEVRYRPVTPLEEDQEERDLYDAIVDAVHELGREGPGDVLVFLP 310
               APVI+  GR +P+++RY      EE  +   + + +  A+ E      G +L FLP
Sbjct: 183 ----APVIQSLGRTFPIDIRY------EERWQGIHVDEKVAKAITEAHASETGSILAFLP 232

Query: 311 GEREIREAAEALRKHHFPGPQPEILPLFSRLSAAEQDRVFKT--GGGRRVVLATNVAETS 368
           G+ EI   A  L +  FP    +I+PL+  LS  EQD   K   GG R++VLAT++AETS
Sbjct: 233 GQAEITRTASRL-EGRFPD-DTDIIPLYGNLSQKEQDAAIKPAPGGRRKIVLATSIAETS 290

Query: 369 LTVPGIRYVVDTGLARVKRYSYRNKVEMLQVERVSQAAARQRAGRCGRVAAGVCIRLYDE 428
           +T+ G+R V+D+GL R+  +     +  L+  RVS+A+A QRAGR GR   G+ IRL+ +
Sbjct: 291 ITIDGVRVVIDSGLQRLPVFEPATGITRLETVRVSRASADQRAGRAGRTEPGIAIRLWHQ 350

Query: 429 ADFNARGEFTDPEILRSSLAGVILRMKALKLTDVESFPFIEAPPPKAINDGYSLLQELGG 488
               A   FT P+IL S L+G+ L +    + D  +  F++APP  A+ +  +LL+ LG 
Sbjct: 351 GQTAALNAFTPPQILASDLSGLALDLAHWGVHDPSALAFLDAPPEAALKESVALLKNLGA 410

Query: 489 LDEDNRLTDVGRGLAKLPLDPRIARMIVAARDRGCLKEVLVIAAALSVQDPRERPQERLQ 548
           LD    LT  G  +  L L PR+A M++A+ + G  K+  ++A  L+ Q       +   
Sbjct: 411 LDNSGGLTRQGHLMRGLSLPPRLAAMVIASAEEGAGKKAAMLAVMLTEQGLGGNDID--- 467

Query: 549 AADEKHRQFADEKSE 563
             DE+ R+F  E+SE
Sbjct: 468 -LDERLRRFFSERSE 481