Pairwise Alignments

Query, 771 a.a., penicillin-binding protein, 1A family from Dechlorosoma suillum PS

Subject, 820 a.a., peptidase from Pseudomonas simiae WCS417

 Score =  587 bits (1513), Expect = e-172
 Identities = 347/819 (42%), Positives = 475/819 (57%), Gaps = 78/819 (9%)

Query: 18  VFIAAGLAVIGAALAGMVLILAYPNLPSLEVLTDYRPKIPLRVYSSDGALIGEFGEERRA 77
           V I  GL ++    +G  L L+ P LPS+E L   + +IPLRVYSSD  LI EFGE RR 
Sbjct: 13  VAIVCGLLLV---FSGAYLYLS-PGLPSVEALRSIQLQIPLRVYSSDEKLIAEFGEMRRT 68

Query: 78  LVRIQDVPPVMKHAILAAEDERFYQHGGVDTLGVLRAAVANLSGGGKRQGASTITMQVAR 137
            +R  D+PP    A+L+AED+ F  H GVD   ++RAA   +  G  + G STITMQVA+
Sbjct: 69  PIRFADIPPNFISALLSAEDDNFANHYGVDPSSLVRAATQLVKSGHIQSGGSTITMQVAK 128

Query: 138 NFFLSSEKTLSRKFYEALLSFKIEHNLSKDEILQLYINQIYLGQRAYGFAAAAQIYFGKS 197
           NFFL+SE++ SRK  E LL+ +IE  L+KDEIL+LY+N+IYLG RAYG  AA+Q+Y+GKS
Sbjct: 129 NFFLTSERSFSRKATEILLALQIERQLTKDEILELYVNKIYLGNRAYGIEAASQVYYGKS 188

Query: 198 LNDITVAEAAMLAGLPKAPSSFNPVVNPKRARLRQQYVLRRMHELHFIDDKQHEEALKQT 257
           + D ++A+ AM+AGLPKAPS FNP+ NP R++ R+ ++L RM++L  ID   +E A+ + 
Sbjct: 189 IRDASLAQMAMIAGLPKAPSRFNPLANPARSKERRDWILGRMYKLGKIDQAAYESAIAEP 248

Query: 258 LVVKRDANEFSVHADYVAEMARQIAAERFPDDVYTRGLRVYTTILKADQEAAYQSLRKGV 317
           L          V+A Y+AEMAR     R+  + YT G RV TT+    QE A  S+  G+
Sbjct: 249 LNASYHVPTPEVNAPYIAEMARAEMVGRYGSEAYTEGFRVTTTVPSNLQEIANDSVHSGL 308

Query: 318 MDYDRRHGYRGAEAYADMKEVQTDQDEDLEDLLSDHNDVGDLQAAIVLQADTKTVKAYKR 377
           + YD+RHGYRG E+    K +     E     L     +  L+ AIV Q     ++   R
Sbjct: 309 ITYDQRHGYRGPESRLPGKTLSAWTTE-----LGKQRAISGLEPAIVTQVKKDGLQVLTR 363

Query: 378 GGELVVLSGDSLKFAARMLDDKA------PPNKRLKRGAIIRLQKDDKGNWQISQLPEVE 431
            GE  V + DS+K+A   L+  +       P+   + G +IR+Q+    + + SQ+P  +
Sbjct: 364 TGEAHV-AWDSMKWARPFLNTNSMGALPKQPSDVAQVGDLIRVQRQKDDSLKFSQVPLAQ 422

Query: 432 SAFVATDPRDGAIRALVGGFDFSRNKYNHVTQAWRQPGSSFKPFIYSAALEKGYTPATIV 491
            A V+ DP++GAIRALVGGF F ++ YN  TQA RQPGSSFKPFIYSAAL+ GYT A++V
Sbjct: 423 GALVSLDPQNGAIRALVGGFAFEQSNYNRATQAKRQPGSSFKPFIYSAALDNGYTAASLV 482

Query: 492 QDSPIVIPASATGSTPWEPHNYDGKYEGPMKLRTALAKSKNMVSIRVLQAIGTQYAQDYA 551
            D+PIV          W P N    + GP+++R AL KS+N+VSIR+LQA+G     DY 
Sbjct: 483 NDAPIVFVDEYLDKV-WRPKNDTNTFLGPIRIREALYKSRNLVSIRLLQAMGVGKTIDYM 541

Query: 552 TRFGFDAEKHPPYLTMALGAGSVTPWQMVSAYAVFANGGYRIQPYVVRDIRDDKGNILAQ 611
           TRFGF     PP L++ALG  ++TP ++ + ++ FANGGY+I PY++  I    G+ L  
Sbjct: 542 TRFGFSKSDLPPNLSLALGTATLTPMEIATGWSTFANGGYKIAPYLIDKIESRNGDTLFT 601

Query: 612 AQPVPV-GDEGN------------------------------------------RAIDPR 628
           A P  V GD  N                                          R +D R
Sbjct: 602 ANPPRVPGDVVNGVAATDGLAAPSNGGITIEPAPGTTPATNAAATEPQTPAVAERIVDGR 661

Query: 629 NAYLMDSMLRDVAIFGTAAKASVQLKRRDLAGKTGTTNDYIDAWFCGYQATVVGCAWVGF 688
             Y+++S+L DV   GT  +A + L R D+AGKTGTTN+  DAWF GY A  V   W G+
Sbjct: 662 TTYILNSILEDVIKKGTGRRA-LALGRPDIAGKTGTTNESKDAWFSGYNADYVTTVWTGY 720

Query: 689 DQPKKLGSGETGGLVSLPIWINYMHTALKDVPESFQPAPEGLVS--VDVPSERSKTGTAK 746
           DQP+ LG  E GG V+LPIW++YM  ALKD P   QP PEG++S  +D  S R+ + +  
Sbjct: 721 DQPESLGRREFGGTVALPIWMSYMGAALKDKPPHTQPEPEGILSLRIDPVSGRAASPSTP 780

Query: 747 ----EFFYSENVPAEV----------PPEPKDDGSKPVD 771
               E F SE+ P  V           P P D+ + P+D
Sbjct: 781 NAYFELFKSEDTPPSVNELGNGVVPGSPLPADEAA-PID 818