Pairwise Alignments

Query, 1044 a.a., heavy metal efflux pump, cobalt-zinc-cadmium from Dechlorosoma suillum PS

Subject, 1045 a.a., efflux RND transporter permease subunit from Dickeya dadantii 3937

 Score = 1130 bits (2923), Expect = 0.0
 Identities = 573/1040 (55%), Positives = 768/1040 (73%), Gaps = 12/1040 (1%)

Query: 1    MLAKIIEWSGRNRFLVLLATLFIIVAGVVAVVRTPLDALPDLSDVQVIVYTEYPGQAPQV 60
            M+A +I WS +NRFLVL+ATL +   GV+++ +TPLDALPDLSDVQVI+   YPG+APQV
Sbjct: 1    MIAAVIRWSIKNRFLVLIATLLMAGWGVISLQKTPLDALPDLSDVQVIIRVSYPGKAPQV 60

Query: 61   VEDQVTYPLTSAMLSVPKSKVVRGFSFFGASFVYIIFEDGTDIYWARSRVLEYLNFAAGR 120
            VE+QVTYPLT+ MLSVP ++ VRGFS FG ++VY++FEDGTD YWARSRVLEYL+     
Sbjct: 61   VENQVTYPLTTTMLSVPGARTVRGFSMFGDAYVYVLFEDGTDPYWARSRVLEYLSQVQST 120

Query: 121  MPKGVTPQIGPDATGVGWVYQYAVLAKN--KTLAELRTLQDWYLRYQLTKAHGVAEVASI 178
            +P      +GPDATGVGW+Y+YA++ ++    LA+LR +QDW L+Y+L     VAEVASI
Sbjct: 121  LPTEAKASLGPDATGVGWIYEYALVDRSGRHNLADLRAIQDWLLKYELKTVPNVAEVASI 180

Query: 179  GGFVQTYQVTVDPVKLRSYGIPLSKVSQVIRDSNRDVGGRVVEMAETEYMVRGKGYLRGT 238
            GG V+ YQV ++P +LR+  +   +V   +R +N++ GG V+E+ E EYMVR  GYL   
Sbjct: 181  GGMVRQYQVVLNPERLRALNVTHQQVIDALRAANQESGGSVIELGEAEYMVRTSGYLLKA 240

Query: 239  ADIENLVVKAQGGTPVMIRDIARVELAPDERRGLTELNGEGEVVSGIAMARYGQNALEVI 298
             D  N+ V  + G PV+++D+A +   P+ RRG+ ELNGEGEV  G+ + R G+NALE +
Sbjct: 241  EDFLNVAVGRRDGIPVLLQDVATLRQGPEMRRGIAELNGEGEVAGGVIVMRSGKNALETL 300

Query: 299  HNLKEKIGEISSGLPEGVTIETVYDRSELIHRAIDTLKHTLAEESVIVALVCVVFLLHLR 358
              +  ++ +I   LP GV I T YDR+ LI RAI TL H L EE V+VALVC +FL H R
Sbjct: 301  RAVHARLQQIRQSLPAGVEIVTTYDRAPLIERAITTLSHKLLEEFVVVALVCSLFLFHFR 360

Query: 359  SALVAILMLPVGVLISFISMRLLGMNSNLMSLGGIAIAIGAMIDAAIVMIENAHKHIERL 418
            S+LVAI+ LP+G+L +FI MR  G+N+N+MSLGGIAIAIGAM+DAAIVMIEN HK IE+ 
Sbjct: 361  SSLVAIISLPLGILGAFIIMRYQGINANIMSLGGIAIAIGAMVDAAIVMIENMHKVIEQW 420

Query: 419  PENHSHSERVEAM-----IAACKEVGPALFFSLLIITVSFLPVFTLEAQEGRLFSPLAYT 473
               H   E   A        A  EVGPALF SLLIIT+SF+PVF+LEAQEGR+FSPLA+T
Sbjct: 421  RHQHPDREPDNATWWQLATQAATEVGPALFCSLLIITLSFIPVFSLEAQEGRMFSPLAFT 480

Query: 474  KTFSMAGAALLSVTLVPVLMMLFIRGKIMPEAKNPVNRFLIWGYRPIIAWVMRRKTATII 533
            KT++MA +A L +TLVPVLM  F+RG+I  E  NP+NR+LI  Y+P++  V+R    T+ 
Sbjct: 481  KTYAMAVSAGLGITLVPVLMGYFVRGRIPDEQANPLNRWLIALYQPVLRQVLRFPKTTLA 540

Query: 534  AAIVAMLISIYPASKLGSEFMPTLNEGTLLYMPASLPGMSITKAAELLQTQNKIIKSFPE 593
             ++  ++++++P ++LGSEFMP L+EG LLYMP++LPG+S  +AA LLQ  +++I++ PE
Sbjct: 541  VSLALLVLTLFPLARLGSEFMPPLDEGDLLYMPSTLPGISPREAARLLQQTDRLIRTVPE 600

Query: 594  VASVYGKAGRANTATDPAPTEMFETVINLKPESEWRQGMTTDKLIAEMDKALQFPGVSNA 653
            V SV+GKAGRA++ATDPAP  M ET I LKP  +WR GMT DKLIAE+D+ +  PG++N 
Sbjct: 601  VDSVFGKAGRADSATDPAPLTMLETTIRLKPREQWRPGMTMDKLIAELDQTVSLPGIANV 660

Query: 654  WTMPIKARIDMLSTGIRTPIGIKVFGKDLSEMESLAREIETVVKEVPGTTSAFAERITGG 713
            W  PI+ R+DML+TGI++P+GIKV G +L ++E +A +IE VVK VPG TSA AER+ GG
Sbjct: 661  WVPPIRNRLDMLATGIKSPVGIKVNGDNLHDIEQIAAQIEQVVKRVPGVTSALAERLAGG 720

Query: 714  YYLNIEPDRTQLARYGLAVGELQDVIGQALGGEMVTTTVEGRERFGVTVRYPRELRSDPQ 773
             Y++I+ DR + ARYG++V ELQ ++   +GGE +  T+EGR+R+ + VRYPRE+R D  
Sbjct: 721  RYIDIDIDRRRAARYGVSVQELQSMVATLIGGENIGETLEGRQRYPINVRYPREIR-DSV 779

Query: 774  QIAQQVLVPTADGAMIPLGQLAKVQVAKGTPGIRTENALLSAYIFVDIRDRDIGGYVADA 833
               + + V T  GA + L  LA V+V++G P +++EN  LS +I+VD+R RD+   V + 
Sbjct: 780  DAVKNLPVVTQSGARLTLSDLADVRVSEGPPMLKSENGRLSDWIYVDLRGRDLKSAVEEM 839

Query: 834  KKAVAEKVKFPPGYYATWSGQFESMERAIEKMKVVVPVTLLIIFLLLYLNFKRLTETLIV 893
            ++ VA++V  P G   +WSGQFE +ERA E MK+VVP TLLIIF+LLY+ F ++ + L++
Sbjct: 840  QRQVAQQVTLPQGISVSWSGQFEYLERATETMKLVVPFTLLIIFILLYVTFGQIKDALLI 899

Query: 894  MLSVPFALVGGVWLMWLLGYNLSVAVAVGFIALAGVAAETGVVMLIYLDHAWEELKTKRR 953
            M ++PFAL+GGVWL++LLGYNLSVA AVGFIALAGVAAE GV+ML+YL+HA E    K R
Sbjct: 900  MGTLPFALIGGVWLLYLLGYNLSVAGAVGFIALAGVAAEFGVIMLLYLNHAVE----KHR 955

Query: 954  ASGQEPSLGDLYEAIMEGAVERVRPKMMTVVAIMAGLLPIMWGTGTGSEVMSRIAAPMVG 1013
              GQ  +   L  AI EGAV RVRPKMMTV  IMAGLLPIMWG GTGSE+M RIAAPMVG
Sbjct: 956  QPGQPLTDEQLTAAIREGAVLRVRPKMMTVATIMAGLLPIMWGGGTGSEIMQRIAAPMVG 1015

Query: 1014 GMISSTILTLAVIPAIYALI 1033
            GM+S+ +L++ VIPA++ L+
Sbjct: 1016 GMVSAPLLSMLVIPALFLLL 1035



 Score = 63.5 bits (153), Expect = 7e-14
 Identities = 66/323 (20%), Positives = 139/323 (43%), Gaps = 15/323 (4%)

Query: 187  VTVDPVKLRSYGIPLSKVSQVIRD--SNRDVGGRVVEMAETEYMVRGKGYLRGTAD-IEN 243
            + +D  +   YG+ + ++  ++       ++G  +         VR    +R + D ++N
Sbjct: 725  IDIDRRRAARYGVSVQELQSMVATLIGGENIGETLEGRQRYPINVRYPREIRDSVDAVKN 784

Query: 244  LVVKAQGGTPVMIRDIARVELAPDERRGLTELNGE-GEVVSGIAMARYGQNALEVIHNLK 302
            L V  Q G  + + D+A V ++     G   L  E G +   I +   G++    +  ++
Sbjct: 785  LPVVTQSGARLTLSDLADVRVS----EGPPMLKSENGRLSDWIYVDLRGRDLKSAVEEMQ 840

Query: 303  EKIGEISSGLPEGVTIETVYDRSELIHRAIDTLKHTLAEESVIVALVCVVFLLHLRSALV 362
             ++ +  + LP+G+++     + E + RA +T+K  +    +I+ ++  V    ++ AL+
Sbjct: 841  RQVAQQVT-LPQGISVSWS-GQFEYLERATETMKLVVPFTLLIIFILLYVTFGQIKDALL 898

Query: 363  AILMLPVGVLISFISMRLLGMNSNLMSLGGIAIAIGAMIDAAIVMIENAHKHIE--RLPE 420
             +  LP  ++     + LLG N ++    G     G   +  ++M+   +  +E  R P 
Sbjct: 899  IMGTLPFALIGGVWLLYLLGYNLSVAGAVGFIALAGVAAEFGVIMLLYLNHAVEKHRQPG 958

Query: 421  NHSHSERVEAMI--AACKEVGPALFFSLLIITVSFLPVFTLEAQEGRLFSPLAYTKTFSM 478
                 E++ A I   A   V P +  ++  I    LP+         +   +A      M
Sbjct: 959  QPLTDEQLTAAIREGAVLRVRPKMM-TVATIMAGLLPIMWGGGTGSEIMQRIAAPMVGGM 1017

Query: 479  AGAALLSVTLVPVLMMLFIRGKI 501
              A LLS+ ++P L +L  R K+
Sbjct: 1018 VSAPLLSMLVIPALFLLLHRNKV 1040