Pairwise Alignments

Query, 367 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 393 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 94.0 bits (232), Expect = 6e-24
 Identities = 86/304 (28%), Positives = 136/304 (44%), Gaps = 13/304 (4%)

Query: 23  EPVRIGFLGGLSDRNTDVGDAGRNGVILAVEQWNREGGIQGRPIELIARDD-AQKAETAA 81
           EPV +G  G L+ +    G   + G  LA+EQ N  GGIQGRP+ +   D  +   +T A
Sbjct: 38  EPVLLGVSGPLTGQYAQYGAQWQCGFDLALEQVNAGGGIQGRPLRVQFEDSQSDPKQTVA 97

Query: 82  RAAAELGQARVEAVIGPFTSAMAAAAVPVLARSDTLLISPTLSAMAFYAKDDNLVRINRS 141
            A   +  +R+ A +G FTSA + AA P+      +    T S   F  K  + V  N  
Sbjct: 98  IARKFVADSRIVAELGDFTSAASMAASPIYQNGGLVQFGFTNSHPDF-TKGGDFVWSNAL 156

Query: 142 TRDNA----GDYARMLYQRGQRRVAVAYDTRNRVFSESWLEEFRRAFTSGGGAIVAEAAY 197
            +        D+A  +   G +RVA+ +   N  +  +  + F +A    G  +V    Y
Sbjct: 157 NQAEEMPVLADFA--VTALGLKRVALLFI--NNDWGRTSKDLFAKAAKERGAEVVGAEGY 212

Query: 198 DSQPDTDFAQVVRRLLRNDPDGLLYIAGAIDVARLAQQSRRQAPRLPIAASEWAASEQLT 257
            +  + DF   + R+    PDG++ ++   D A++ +Q R      P+ AS    S +  
Sbjct: 213 LAD-EKDFRSALVRVRDTKPDGIVLVSYYADGAQITRQLREAGLTQPVVASGSVYSPKFL 271

Query: 258 ELGGSLVEGLLILQNYNRYDESPRYVAFRDAFAQRFQRLPGYSAVAAYDAATVLFTALSR 317
           ELGG+ VEG+     +   D       F  A+  ++   P   +  AYDA  +L T +  
Sbjct: 272 ELGGAAVEGVHTTTPFFPGDPRREVQTFVKAYTAKYGLEPDAYSSRAYDALLLLATVI-- 329

Query: 318 RQRG 321
           RQ G
Sbjct: 330 RQSG 333