Pairwise Alignments

Query, 486 a.a., putative permease from Dechlorosoma suillum PS

Subject, 351 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 63.9 bits (154), Expect = 8e-15
 Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 11/186 (5%)

Query: 262 GWTRLCLSLVALTLLVAALSVQAVPGGLRLGLGGKFLGVAL-ALAVLTWLGSRHLTAEDR 320
           GW    L LVA  +LV  +S+ A     R+    +    AL A+A ++ + S+   +   
Sbjct: 170 GWGFTALRLVAGIVLVVGVSLVAQ----RISRPDQVPEPALEAMAEVSVVESQPFLSR-- 223

Query: 321 RAWLWESWRFVKQIFPLLVIGVFVVGMIRVVLRPEWIEMVAGSNTLLGNLAGVGFGVFMY 380
             WL   W+      P+ ++ V ++G  RV L P     +  S   L  LA VG      
Sbjct: 224 --WLRTLWQLFWSTIPVYILAVLILGAARVWLFPHVDGAMTNSLVWLVPLAIVG--TLFV 279

Query: 381 FPTLVEVPIAKMFLDLGMHRGPLLAYLMSDPELSLQSILIITAIIGRTKTWTYVGLVALF 440
            PT  E+PI +  + LGM  GP +A LM+ P +SL S+L++          T  GL  L 
Sbjct: 280 IPTAAEIPIVQTMMALGMGTGPAVALLMTLPSVSLPSLLMLRKDFDARVLATVAGLTMLV 339

Query: 441 SAAAGL 446
               GL
Sbjct: 340 GVVCGL 345



 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 2/117 (1%)

Query: 34  AFCIAGAMAALIPKETITRFLGRQTPKTVSYPAAAAAGSVLAVCSCTIVPLFAGIYRKGA 93
           A  +   +  LIP++ + R  GR    +       A   ++  CSC   P+ AG+ R+  
Sbjct: 85  AVILGSLLQVLIPRDWLLRLFGRAGLGSTLRGGLFALPGMM--CSCCAAPVAAGMRRQQV 142

Query: 94  GLGPATTFLFFAPAANILALVYTGGIIGVDLAVARLLLSLTFAIGIGLIMALLFRAD 150
            +G A  F    P  N   LV+ G ++G      RL+  +   +G+ L+   + R D
Sbjct: 143 SVGAALAFWIANPVLNPATLVFMGFVLGWGFTALRLVAGIVLVVGVSLVAQRISRPD 199



 Score = 31.6 bits (70), Expect = 5e-05
 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 4/94 (4%)

Query: 55  GRQTPKTVSYPAAAAAGSVLAVCSCTIVPLFAGIYRKGAGLGPATTFLFFAPAANILALV 114
           G  T   V     A  G++  + +   +P+   +   G G GPA   L   P+ ++ +L+
Sbjct: 259 GAMTNSLVWLVPLAIVGTLFVIPTAAEIPIVQTMMALGMGTGPAVALLMTLPSVSLPSLL 318

Query: 115 YTGGIIGVDLAVARLLLSLTFAIGI--GLIMALL 146
                   D  V   +  LT  +G+  GLI A+L
Sbjct: 319 MLRK--DFDARVLATVAGLTMLVGVVCGLIGAVL 350