Pairwise Alignments

Query, 633 a.a., penicillin-binding protein 2 from Dechlorosoma suillum PS

Subject, 629 a.a., transpeptidase (penicillin-binding protein 2) from Pseudomonas putida KT2440

 Score =  518 bits (1335), Expect = e-151
 Identities = 278/619 (44%), Positives = 398/619 (64%), Gaps = 27/619 (4%)

Query: 6   LSSSDREQEQFRFRLGFAAGMVLLCFVILFARFFWLQVVKHDYYSTRAEENRISLVPIIP 65
           L   +++    R R+   A  ++L   +L AR ++LQ++++DY+ST +E NR+ + PI P
Sbjct: 7   LKDHEKDARLVRKRVVVGAVAIMLLVCVLIARLYYLQIIQYDYHSTLSENNRVHVQPIPP 66

Query: 66  NRGLIVDRNGVVMARNYSAFTLEITPSRL---QEDLETVIEQIGTLIPITPKDRKRFKKL 122
            RGLI DRNGV++A N  +F+L +T  R    QE L+T++E    ++ +T  DR  F+K 
Sbjct: 67  TRGLIFDRNGVIVADNRPSFSLSMTRERAGNWQEVLDTIVE----VLDLTADDRALFEKR 122

Query: 123 MEESKN-FESIPIRTRLSDDEVARFAANRYRFPGVEVKARLFRQYPLGDVASHALGYMGR 181
           M + +  FE +PI   L+++++AR A N++R PGVEV A+L R YP G   +H++GY+GR
Sbjct: 123 MRQGRRPFEPVPILFELNEEQIARVAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYVGR 182

Query: 182 INDKDLETIDNAEQTPNYKGTEHIGKAGLEQNYEFQLHGETGYEEVEVDAGGRAVRVLSR 241
           IN+K+L+T+D      NY GT HIGK G+E+ YE  LHG+ GYEEVE +A GR +RVL R
Sbjct: 183 INEKELKTLDPV----NYSGTHHIGKTGIERFYEAALHGQVGYEEVETNARGRVLRVLKR 238

Query: 242 TAPVSGNNLSLTLDSKLQEITEQAFGSRRGALVAIEPSTGGILALVSKPTYDPNLFVDGI 301
           T P  G ++ L+LD KLQE  E A G RRGA+VA++P TG +LA+VS+P++DPNLFV GI
Sbjct: 239 TDPKPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPRTGEVLAMVSQPSFDPNLFVTGI 298

Query: 302 RGDDWDGLNTDPDKPLLNRAIYSAYPPGSTFKPFMALAALVQGKRTPSQAIADPGYFNFG 361
               +  L    D+PL NR +   YPPGST KP +A+A L  G    S  + DPGY+   
Sbjct: 299 SFKAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVNASSRVFDPGYYQLP 358

Query: 362 G--HQFRDDKKGGHGMVDMYKSIVESCDTYYYILANDMGIDNIAAFMGQLGLGQRTGVDI 419
              H++R+  + G G VD+  +I+ S DTY+Y LA+ MGID ++++M + G+GQR  +D+
Sbjct: 359 NYDHKYRNWNRSGDGWVDLDTAIMRSNDTYFYDLAHKMGIDRLSSYMNKFGIGQRVSLDM 418

Query: 420 QGESEGVLPSQAWKKRRFKKPEHQKWYAGETISIGIGQGYNAYTPIQLAQAVATIANDGV 479
             ES G++PS+ WK    +    Q W+ GET+ +GIGQGY   TP+QLAQA A IAN GV
Sbjct: 419 FEESAGLMPSREWK----RATRRQAWFPGETLILGIGQGYMQATPLQLAQATALIANKGV 474

Query: 480 MYRPHLVKYITNSRSGEKTMVEPQPIRDLKLKPE-HLAVIKNAMVGV--NKAGTGARAFA 536
             RPHL K I          V+  P+ D+ L+ +   A + + M  V  N  GT  +A A
Sbjct: 475 WNRPHLAKTIEG-----LPPVDDNPMEDIVLRDKSDWAKVTHGMEQVMHNARGTARKAAA 529

Query: 537 GAGYESAGKTGTAQVFSLK-GEKYVEGATKHHLRDHSLFIAYAPAEQPKIALAVIVENGG 595
           GA Y  AGK+GTAQV ++K GEKY     +   RDH+LF+A+APAE PKI ++V+VENG 
Sbjct: 530 GAQYRIAGKSGTAQVVAIKQGEKYDRNKLQERHRDHALFVAFAPAEAPKIVVSVMVENGE 589

Query: 596 FGAAAAAPIARMVLDYYIL 614
            G+  AAP+ R ++D ++L
Sbjct: 590 SGSGVAAPVVRQIMDAWLL 608