Pairwise Alignments

Query, 384 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 384 a.a., ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score =  188 bits (478), Expect = 2e-52
 Identities = 124/390 (31%), Positives = 193/390 (49%), Gaps = 20/390 (5%)

Query: 1   MSRKTLIAALLPLATGL---AAVPAWADINVGVSLAATGPAASLGIPEKNSIALLPTT-- 55
           M+ K    A L + +GL   A+  A   I +G+ L+ TG  + +G P+K +   +     
Sbjct: 1   MNWKRTAGAALAVMSGLGYAASALAADPIKIGMFLSVTGQMSPMGDPQKRTFDYMIEKIN 60

Query: 56  ----VAGQKVNYIVLDDATDSTTAVKNIKKLISESKVDLVIGSSTTPSSLAMMDVAVENE 111
               V G+KV  ++ DD ++   A   +K+LI   KVDL+IG S TP+S+A++ +    E
Sbjct: 61  AQGGVLGRKVEAVIYDDGSEPEKAATFVKRLIDNDKVDLIIGGSGTPTSMAVLGLIERAE 120

Query: 112 TPMISMAGSAIVVEPMDAKRHWVFKSAQNDAHMATAIVEHMTNNNVHSVAFIGFADAYGQ 171
            P +S+ G   + +P+   R W FK  Q+D   A  ++  +    +  +A +     +G+
Sbjct: 121 VPYLSLGGGTAIGDPV---RKWTFKFPQSDRLAAEKVLVDLKKRGLTKIALLSENVGFGK 177

Query: 172 GWFKEFAKIAEARKIKIVANESYQRNDTSVTGQTLKILA-AKPDAVLVGAAGTPAVLPQK 230
               +  K+A    I+I+ +E Y   D  VT Q  KI   A   A+ +   GT   +  K
Sbjct: 178 SGHDQTVKLAPQHGIEILIDEVYSPKDPDVTPQLTKIRGTAGVQALFIFGTGTGPAVVTK 237

Query: 231 TLKEKGYKGAIYQTHGVANADFLRVGGKDVEGALLPVGPMMVAEQLPNDNPVKKSALEYV 290
            L++ G     YQ+HGVA+ +FLR+ G   +G  LP G   VAEQLP ++P K   + + 
Sbjct: 238 NLRQMGLNLPTYQSHGVASKEFLRLVGTAADGMRLPAGAQAVAEQLPANDPQKAVTMAFK 297

Query: 291 KKYEGVHGKGSISSFGGHAWDAGVLLSNAIPAALKKAQPGTKEFRKALRDAIEGSKNLPA 350
           K+YE  +         GH  DA ++  +A   A      GT +  K +RDAIE +K   A
Sbjct: 298 KEYEEKNKPLEAGPLPGHGLDALMMAMDAFKRA------GTTDKAK-VRDAIEQTKGFVA 350

Query: 351 AHGIFNMTPQDHQGFDQRARVMVKVENGTW 380
             GIF  +P DH G    A  MV ++NG W
Sbjct: 351 TTGIFTYSPTDHMGLGLDAFHMVDIKNGDW 380