Pairwise Alignments

Query, 445 a.a., ribosomal RNA small subunit methyltransferase RsmB from Dechlorosoma suillum PS

Subject, 436 a.a., 16S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score =  316 bits (810), Expect = 8e-91
 Identities = 195/428 (45%), Positives = 244/428 (57%), Gaps = 14/428 (3%)

Query: 32  LLASAAVAAVQAGR-SLTEVLAQQAKGELGPTRAQAQDLAYGALRRYGWGEAVLAALLQK 90
           L A+ A+AAV +G+ SL   L  Q        R   QDLA+G  R      A+ A LLQK
Sbjct: 5   LAAAKALAAVLSGKASLNSSLPTQLDKVEDRDRGFTQDLAFGTARWQPRLSALAATLLQK 64

Query: 91  PLP--EPQLQSLLLCALYRLESRPEQSHTVVDQAVAAAATLAKGNFRGVINGVLRSYLRQ 148
           P    +  +++LLL  LY+L      +H  + + V  A  L K   + ++N VLR   R+
Sbjct: 65  PFKAADADVEALLLVGLYQLLYTRVPAHAAIGETVGCADKLKKPWAKALLNAVLRRAQRE 124

Query: 149 RPELLARAAGKPSGAWWHPDWWLSRLRRAYPRDWEAIATAGNGQPPMTLRVNLARGSREE 208
              LLA     P     HP W    L+  +P  WEAI  A N  PPM LRVN    SR+ 
Sbjct: 125 SEALLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDA 184

Query: 209 YQARLDAAGIAAVPLGSAA--LLLQKPVPVDALPGFFDGFVSVQDWGAQRAAELLDARAG 266
           Y   L  AGI A P   +   ++L+    V +LPGF +G++SVQD  AQ AA+LLD   G
Sbjct: 185 YLQLLTDAGIGATPCVYSVDGIVLEAATDVRSLPGFAEGWISVQDEAAQLAADLLDLAPG 244

Query: 267 QRVLDACAAPGGKTAHILEQAG--VDLLALDMDGLRCRRVEENLSRLGLRAVVRAADARC 324
           QRVLDAC APGGKT HILE     V ++A+D++  R  RV ENL+RLGL A + AAD R 
Sbjct: 245 QRVLDACCAPGGKTCHILEVEKDLVGVVAVDLEAKRLVRVRENLARLGLSAELIAADGRD 304

Query: 325 PDDWWDGRPFDRILADVPCSASGVVRRHPDSKWLRRETDIAQFARVQRQILEVLWPTLAV 384
              WWDG+PF RIL D PCSA+GV+RRHPD K  R+  DIA  A +Q ++L+ LWPTL V
Sbjct: 305 TATWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALAVLQGELLDALWPTLEV 364

Query: 385 GGRLLYATCSVFPEENSQQVSAFLARHGDARRI------GIDGADELQLL-PGSEHDGFY 437
           GG LLYATCS  P EN++ + AFLAR   AR +      GI      QLL     HDGFY
Sbjct: 365 GGILLYATCSTLPTENTEVIEAFLARTSGARELDLATTAGIRQPHGRQLLAQEGGHDGFY 424

Query: 438 YALLEKTA 445
           YA L K A
Sbjct: 425 YAKLIKIA 432