Pairwise Alignments

Query, 445 a.a., ribosomal RNA small subunit methyltransferase RsmB from Dechlorosoma suillum PS

Subject, 431 a.a., tRNA and rRNA cytosine-C5-methylases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  139 bits (350), Expect = 2e-37
 Identities = 105/319 (32%), Positives = 152/319 (47%), Gaps = 24/319 (7%)

Query: 134 FRGV-INGVLRSYLRQRPELLARAAGKPSGAWWHPDWWLSRLRRAYPRDWEAIATAGNGQ 192
           F GV +N V R Y     +L +RAA +       PDW           +W+    A N Q
Sbjct: 127 FEGVHVNAVKRKY----EDLTSRAALQSI-----PDWLDEMGAELLGEEWDDEINALNEQ 177

Query: 193 PPMTLRVNLARGSREEYQARLDAAGIAA-VPLGSA-ALLLQKPVPVDALPGFFDGFVSVQ 250
             + LR N  + +RE    RL   G+    P G   AL+L K   +   P F +G   +Q
Sbjct: 178 AQVVLRANTLKTTREALMNRLQEDGVETYAPKGYPDALVLAKRQNIFRNPAFKEGLYEIQ 237

Query: 251 DWGAQRAAELLDARAGQRVLDACAAPGGKTAHILEQAGVD--LLALDMDGLRCRRVEENL 308
           D  +Q  A+ L    G RV+DACA  GGK+ H+    G    +L++D++G + +  +   
Sbjct: 238 DASSQLVAQALGVEPGMRVIDACAGAGGKSLHLATLMGDKGRVLSMDIEGWKLKNTKLRA 297

Query: 309 SRLGLRAVVRAADARCPDDWWDGRPF----DRILADVPCSASGVVRRHPDSKWLRRETDI 364
            R G+  +    + R  +D    +      DR+L DVPCS  GV+RR+PD+KW      I
Sbjct: 298 RRNGISII----ETRTIEDNKTIKRLKASADRLLLDVPCSGLGVLRRNPDTKWKLSPESI 353

Query: 365 AQFARVQRQILEVLWPTLAVGGRLLYATCSVFPEENSQQVSAFLARHGDARRIGIDGADE 424
           A    +Q+ IL+     +  GG ++YATCS+ P EN +QV  FL          +D  D+
Sbjct: 354 ANVQLIQQDILQNYCSMVKPGGIMVYATCSILPTENQRQVEKFLESEKGQDFTFLD--DQ 411

Query: 425 LQLLPGSEHDGFYYALLEK 443
             L   S  DGFY A LE+
Sbjct: 412 KVLAHESGFDGFYIARLER 430