Pairwise Alignments

Query, 445 a.a., ribosomal RNA small subunit methyltransferase RsmB from Dechlorosoma suillum PS

Subject, 461 a.a., Sun protein from Agrobacterium fabrum C58

 Score =  154 bits (388), Expect = 7e-42
 Identities = 139/473 (29%), Positives = 214/473 (45%), Gaps = 51/473 (10%)

Query: 4   RNSPPAARRPSPVRS-APEPAPDSLA-----RALLLASAAVAAVQAGRSLTEVLAQQAKG 57
           ++ P  +R+P P  +   E  P S        A + A+  +AAV   ++  + +     G
Sbjct: 6   QSKPARSRKPKPAHARGREDGPSSFEDKPGLAARIAATRILAAVLEKKTSMDGMLDSENG 65

Query: 58  ELG------PTRAQAQDLAYGALRRYGWGEAVLAALLQKPLPEP--QLQSLLLCALYRLE 109
                      RA  + +   ALR     E  L+ LL  PLP+    L  +L+    ++ 
Sbjct: 66  NPVYRALSLADRALVRAVVNSALRHLPRIETALSMLLDGPLPQGARSLHHVLVVGAAQML 125

Query: 110 SRPEQSHTVVDQAVAAAATLAKGN-FRGVINGVLRSYLRQRPELLARAAGKPSGAWWHPD 168
                 H+ VD AV  A    +   F  ++N VLR   R++ E+    A  P      P+
Sbjct: 126 YLDVPDHSAVDLAVEQAHRDPRNRRFVKLVNAVLRRLGREKAEIEKAIADVPV----LPE 181

Query: 169 WWLSRLRRAYPRDWEAIATAGNGQPP---MTLRVNLARGSREEYQARLDAAGIAAVPLGS 225
           W+ +RL  AY  +     +     P    +T++ + A  +        +  G   +P GS
Sbjct: 182 WFYARLVSAYGDEVAQRISQAQLTPSCIDLTVKADPALWA--------ERLGGTLMPNGS 233

Query: 226 AAL-LLQKPVPVDALPGFFDGFVSVQDWGAQRAAELLDARAGQRVLDACAAPGGKTAHIL 284
             L   +  +P  +L GF +G   VQD  A     LL   +G+RV D CAAPGGKTA  L
Sbjct: 234 VRLGEFEGQIP--SLDGFAEGAWWVQDLAASMPVRLLGDISGKRVADLCAAPGGKTAQ-L 290

Query: 285 EQAGVDLLALDMDGLRCRRVEENLSRLGLRAVVRAADARCPDDWWDGRPFDRILADVPCS 344
             AG  + ALD  G R RR+ ENL RLGL A    A+      +   + FD +L D PCS
Sbjct: 291 ALAGARVTALDQSGNRLRRLRENLDRLGLHAETVEANML---KYQPEQLFDAVLLDAPCS 347

Query: 345 ASGVVRRHPDSKWLRRETDIAQFARVQRQILEVLWPTLAVGGRLLYATCSVFPEENSQQV 404
           ++G +R+HPD  W + E DIA+ A +Q Q+L      +  GG ++++ CS+ P E  + +
Sbjct: 348 STGTLRKHPDVCWTKDENDIAKLAALQGQMLRHALTLVGPGGLVVFSNCSLDPSEGEEMI 407

Query: 405 SAFLARHGDARRI------------GIDGADELQLLPG--SEHDGFYYALLEK 443
           +  LA + D  R+             I  A +L+  P      DGF+ ++L K
Sbjct: 408 AEVLAENPDVERVAVHREDWPGMEAAISAAGDLRTTPDMFGGVDGFFSSVLRK 460