Pairwise Alignments

Query, 750 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  244 bits (622), Expect = 3e-68
 Identities = 150/435 (34%), Positives = 237/435 (54%), Gaps = 13/435 (2%)

Query: 316 LARLRQARQEVEAAHAVFS----ASPDPMVMLQRDPGGHFHYRYFNPAALTLAGRRAEEM 371
           +++L++ +Q+++ +   F+    ASPD +++ ++  G        N     L G      
Sbjct: 546 ISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEV---NEGFCRLTGYDLNPT 602

Query: 372 QHHPLDQVLTPEDALRRQLMLEQTVRSGQVQEAEQTTTYPSGE-RTVRWTAVPVHDGSDH 430
                  +    D   R+ +++Q  R G V++         G+ R    +A P+      
Sbjct: 603 IDQTSLDLGIWVDLNERKRLVDQLNRDGFVRDFTCHIRRSDGQIRLCELSARPLPITG-- 660

Query: 431 ISHVALIGHDLTQLREEQRQLWLSDAIVAQTHEAVMVTDASERIFRVNPAFCLMTGYAPE 490
           +  +  I  D+T+    Q +L L+  +   T E V++TD  +RI  VN AF  +TGY+  
Sbjct: 661 VDCMLTIARDITERHLMQEKLQLAATVFENTAEGVLITDIDQRISAVNRAFSEITGYSEI 720

Query: 491 EVEDHSPGLLASGVHDAEFYHHMHQALQSRGFWQGEVWQRHKDGHLFACLLDISTLRDGE 550
           E    +P LLASG HD+ FY  M   L + G WQGE++ + K+G L+   L IS +R+ +
Sbjct: 721 EALGQTPRLLASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGELYPSWLTISAVRNSD 780

Query: 551 GRLTHYVHVFSDITEQKHLAEQMEHLAHFDGLTQLPNRNLFQDRLCQALARAERNGTGLA 610
             +TH+V VF+DI+  KH   ++++ AH D LT LPNR LF++RL   L  A+ +    A
Sbjct: 781 REITHFVAVFADISSIKHAQAKLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGA 840

Query: 611 LMFMDLDGFKAVNDSAGHNTGDRLLVEVARRITSVLRKVDSVSRQGGDEFTVLLESLNNG 670
           ++F+DLD FK +NDS GH  GD LL  +A+R+   +R VD+V+R GGDEF +LL  L+  
Sbjct: 841 VLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKP 900

Query: 671 QGIAETEEAARRIIAAINEPVLLDGRSFRVGASIGIAFYPADGDNVELLMARADAAMYQA 730
              ++    A +++A  N P       F   ASIGI+ YP DG +V  L+  ADAAMY++
Sbjct: 901 ---SDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRS 957

Query: 731 KARGKNRHLCWTPEL 745
           KA+G+NR   +T +L
Sbjct: 958 KAKGRNRVEAYTRDL 972



 Score = 32.7 bits (73), Expect = 1e-04
 Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 6/102 (5%)

Query: 391 MLEQTVRSGQVQEAEQTTTYPSGERTVRWTAVPVHDGSDHISHVALIGHDLTQLREEQRQ 450
           +L + +  G ++  E +    +G+     T+    +  D    + +   D++QL+E Q+Q
Sbjct: 497 LLLERLHQGGIRNLEMSFRRSNGQLFTGLTSAETFE-LDGTPALVVAVRDISQLKETQQQ 555

Query: 451 LWLSDAIVAQTHEA-----VMVTDASERIFRVNPAFCLMTGY 487
           L  S+   A+   A     ++   +   +  VN  FC +TGY
Sbjct: 556 LQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGY 597



 Score = 27.3 bits (59), Expect = 0.005
 Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 17/135 (12%)

Query: 483 LMTGYAPEEVE--DHSPGLLASGVHDAEFYHHMHQALQSRGFWQGEVWQRHKDGHLFACL 540
           L TG    E    D +P L+ + V D        Q LQ+      + +    DG L +  
Sbjct: 521 LFTGLTSAETFELDGTPALVVA-VRDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQ 579

Query: 541 LDISTLRDGEG--RLTHY------------VHVFSDITEQKHLAEQMEHLAHFDGLTQLP 586
            D   L   EG  RLT Y            + ++ D+ E+K L +Q+         T   
Sbjct: 580 SDGLLLEVNEGFCRLTGYDLNPTIDQTSLDLGIWVDLNERKRLVDQLNRDGFVRDFTCHI 639

Query: 587 NRNLFQDRLCQALAR 601
            R+  Q RLC+  AR
Sbjct: 640 RRSDGQIRLCELSAR 654