Pairwise Alignments

Query, 1306 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 923 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  273 bits (699), Expect = 4e-77
 Identities = 188/568 (33%), Positives = 295/568 (51%), Gaps = 21/568 (3%)

Query: 546  GGMVGVVVDISERKLMEEELRRARATAEEATE--AKSLFLANMSHEIRTPMNAIIGMAHL 603
            G ++ + +   +R ++E     +R  A    E  AK+ FLA +SHEIRTPMN ++GM  L
Sbjct: 364  GLLMSLALGERQRAIVEARFSLSRDLAASNAEIAAKAEFLAKISHEIRTPMNGVLGMTEL 423

Query: 604  AMKTELTPKQRDYVGKIHNAAISLLGIINDILDFSKIEAGKLSLEYVPFSLEDVLDNVSG 663
             + T L+ KQRDYV  IH+A   LL +IN+ILD SK+E+G++ L+ V F L  ++++   
Sbjct: 424  LLGTPLSVKQRDYVQTIHSAGNELLTLINEILDISKLESGQIELDDVQFDLNALIEDCLS 483

Query: 664  LLGLKANEKGLELLFNVNAGTPAGLVGDPLRLNQILTNLVSNAIKFTERGQITLTTRPVD 723
            +   KA ++ +EL+  +    P  + GDP RL Q + +L+ NA++ T+ G++ +    +D
Sbjct: 484  IFRAKAEQQNVELISFIQPQVPRVISGDPTRLRQAMLSLLENALQKTDEGEVLIVV-ALD 542

Query: 724  QAGDRVKLQFWIEDMGIGM---SREQLLHLFQAFTQADGSTTRKYGGTGLGLSISRRLVE 780
                + +L+  ++D G+ M    R+ LLH  +  ++   S TR  G   LGL I+R+L+ 
Sbjct: 543  DRSTKPRLRIAVQDSGLPMEAAERDALLH-SELHSKNFFSATRLNG--HLGLVIARQLIL 599

Query: 781  MMGGTIWADSTLGEGSTFCFTAWFGRAEELARPRT-LPASLAGLRVLVADDNGAAREILG 839
            +M G     S   +GST   T      E L  P + L   L G RVLV DDN   R++L 
Sbjct: 600  LMNGEFGIKSGSHQGSTLWLTLPLD-PERLEHPTSDLDGPLKGARVLVVDDNDTCRKVLV 658

Query: 840  EALRHLDLRPDLVASGAEALAQLTEMQGGADPYRVLFLDWQMPDLDGVSTLHKLQQALPQ 899
            +      L    V SG EALA L       D + V+ LD  MP + G+    K+++    
Sbjct: 659  QQCSAWGLNVSAVPSGKEALALLRTKAHLRDYFDVVLLDQNMPGMTGMQLAAKIKEDPSL 718

Query: 900  AQWPRVVMVTAYDQEELRRQTENLGICGILVKPVSA----STLFDVLVSLVDADNAPATP 955
                 ++M+T       +    N GI  IL KPV+     +TL D L      +  P   
Sbjct: 719  NHDILLIMLTGISNAPSKIIARNCGIKRILAKPVAGYTLKTTLADELTQRSKGNVPPRPV 778

Query: 956  LHIAAPQTRIDGMRILLAEDNEINQQIAVELLQSMGAQVTVAGDGLQAVELLERSPDDSF 1015
            L+  A  T     RIL+AEDN I+ ++   +L  +      A +G +A+E ++      +
Sbjct: 779  LNTPAAITVPTDFRILVAEDNSISTKVIRGMLGKLNLNPDTASNGEEALEAMKA---QRY 835

Query: 1016 DLVLMDLQMPHLDGYDATERLRC---QQRFAHLPILAMTAHAMPEERERCLAIGMNDHLA 1072
            DLVLMD +MP LDG+ AT++LR      +    P++A+TAH + E +ER    GM+ H+A
Sbjct: 836  DLVLMDCEMPILDGFSATQQLRAWEVSHQRVRTPVVALTAHILSEHKERARQAGMDGHMA 895

Query: 1073 KPIDPTALAATLARWYEERPGASAPAPT 1100
            KP++ + L   +  W  +R      AP+
Sbjct: 896  KPVELSQLRELVEFWVAQRQQRPEHAPS 923