Pairwise Alignments

Query, 1306 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 1279 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  590 bits (1522), Expect = e-172
 Identities = 393/995 (39%), Positives = 546/995 (54%), Gaps = 70/995 (7%)

Query: 341  LLAVLAVLALGLGLGVVMAARLARRVAVPLDILAGDSERIGALDFSPRQYRRTGWREIDR 400
            L+ +L  L + LG+         RR   PL+  A      GA           G  EI  
Sbjct: 303  LITLLVALLVWLGV---------RRSLAPLERAARQIGETGAGHIPLEPVEVQGSGEIRM 353

Query: 401  LAA----AQEHM---RETLQDATLRLEERVEQRTRELADAREESSRQLVLLQAIMDSMPN 453
            L       Q+H+    ET++     LE  VE+RT EL    +         QA+ D+   
Sbjct: 354  LLQNFNLLQQHIAAQNETIRQERDHLEVLVEERTAELVGLAKSLRDANQEQQAVFDAARI 413

Query: 454  PVFFKDAEGRFLGCNRAYEDTFGVGRGQIVGKTVR-----ELPFLSEEEKQELQAVSEAI 508
             +     +     CNR  E+  G   G+I+ ++ R     E  FL+  E+     V E +
Sbjct: 414  GIILT-RDRIIRRCNRTIEEILGYEPGEILEQSTRIWYPDEATFLAVGER-----VREGL 467

Query: 509  IRDGIMMHRELQLPFADGLRHDTLYWANGFSREDGTPGGMVGVVVDISERKLMEEELRRA 568
             R G     EL+L   DG R      A    R +    GM G V DI E + +  E+ +A
Sbjct: 468  TRHGYF-REELELVRKDGSRFWGRIMAQVIDR-NAPEKGMAGTVEDIGEERRILAEMAQA 525

Query: 569  RATAEEATEAKSLFLANMSHEIRTPMNAIIGMAHLAMKTELTPKQRDYVGKIHNAAISLL 628
            +A AE A +AK+ FLANMSHEIRTPMNA+IGM HLA+KT+L  +QR+Y+ KI +++  LL
Sbjct: 526  KALAEAAAQAKADFLANMSHEIRTPMNAVIGMTHLALKTDLDERQREYLRKIQHSSQHLL 585

Query: 629  GIINDILDFSKIEAGKLSLEYVPFSLEDVLDNVSGLLGLKANEKGLELLFNVNAGTPAGL 688
            GIINDILDFSK EAGKL +E + F LE VL++VS L+  +A  KGLE +  +    P  L
Sbjct: 586  GIINDILDFSKSEAGKLHIEQIDFDLEKVLEDVSSLMSERATSKGLEFVIEMADEVPRHL 645

Query: 689  VGDPLRLNQILTNLVSNAIKFTERGQITLTTRPVDQAGDRVKLQFWIEDMGIGMSREQLL 748
            VGDPLR+ Q+L N  SNA+KFTERG++ +     +  G  V L+F + D GIG+   +L 
Sbjct: 646  VGDPLRIGQVLINYASNAVKFTERGEVAIHVGLEEDQGQEVLLRFAVHDTGIGIKAGELP 705

Query: 749  HLFQAFTQADGSTTRKYGGTGLGLSISRRLVEMMGGTIWADSTLGEGSTFCFTAWFGRAE 808
             LF +F QAD STTRKYGGTGLGL I++RL E+MGG + A+S  G GSTF FTA  GR+ 
Sbjct: 706  TLFNSFQQADSSTTRKYGGTGLGLVIAKRLAELMGGQVGAESEPGRGSTFWFTARLGRSS 765

Query: 809  ELARPRTLP-ASLAGLRVLVADDNGAAREILGEALRHLDLRPDLVASGAEALAQLTEMQG 867
              AR R  P   L   R+LV DD+  AR+++ + LR +  +     SG   LA+L     
Sbjct: 766  N-ARHRAPPRPDLRTRRLLVVDDHDHARDVVCDMLRSMSFQVSDTDSGNRCLAELQRASA 824

Query: 868  GADPYRVLFLDWQMPDLDGVSTLHKLQQALPQAQWPRVVMVTAYDQEELRRQTENLGICG 927
              +PY ++FLDWQMP++DG++T  ++++ L   Q P V+M+TAY ++EL R     G+ G
Sbjct: 825  AGEPYDIVFLDWQMPEMDGLATAREIRR-LELPQPPLVLMITAYGRDELARSAGESGLQG 883

Query: 928  ---ILVKPVSASTLFDVLVSLVDADNAPATPLHIAA-PQTRID-----GMRILLAEDNEI 978
               IL+KPVS S LF+ ++ ++D ++ P    H AA P+   D     G+R+LL EDN++
Sbjct: 884  IEEILIKPVSPSQLFNTVMRILDHEDGP----HSAADPEALPDLAPLAGLRVLLVEDNQL 939

Query: 979  NQQIAVELLQSMGAQVTVAGDGLQAVELLERSPDDSFDLVLMDLQMPHLDGYDATERLRC 1038
            NQ++A E L      V VA DG  A   LE+     +D++LMD+QMP +DG  AT  +R 
Sbjct: 940  NQEVASEFLAGANMVVDVADDGASA---LEKVRQQRYDVILMDMQMPVMDGIAATREIRR 996

Query: 1039 QQRFAHLPILAMTAHAMPEERERCLAIGMNDHLAKPIDPTALAATLARWYEE-----RPG 1093
            Q   A LPILAMTA+AM ++RERCLA GMNDH+AKP+DP  L   L +W         P 
Sbjct: 997  QFPAAVLPILAMTANAMEQDRERCLAAGMNDHIAKPVDPRDLLGKLLKWLAPGAPLVAPQ 1056

Query: 1094 ASAPAP----------TPAKDGTDALPPIPGVNTTQGLARMAGNQALYRRLLLRFVDTQT 1143
            A+AP P           PAK        IPG++ T GL +    + LY RL+ +FV  Q 
Sbjct: 1057 AAAPLPGTVTPTPPVAAPAKADRQPFAGIPGLDATLGLHQALDREGLYLRLMDKFVSGQR 1116

Query: 1144 GTGEHIRQALADGDITAAEHLAHTLKGVAGNIGAEVLQQKATALDQALRRNDGQGQKLES 1203
               + + +A+  GD   AE  AHTLKGV+  IGA  L+  A  L+ A+R+ D     L+ 
Sbjct: 1117 DAPQRLARAIDAGDWVGAEREAHTLKGVSAQIGAMPLRDLAEGLEHAIRQRD-PPDLLQD 1175

Query: 1204 LRQRLAEELAAVTGAIAAALAEEGGPAPTQAAPLDADQRHRARQLLAELAEQLEASEIHA 1263
            L  ++A+ L  +  AIAA LA +  PA             +  ++ A LA+QL   +   
Sbjct: 1176 LLGKIADSLPPLVDAIAAVLATQEVPAAKATV-----NWMQVEEVCARLAQQLANDDFAC 1230

Query: 1264 GQLFRESRALLAGLLPPADLTGLEKAIADYDYDRA 1298
             +L  E  ALL G L   D   L +A+ D+D+ +A
Sbjct: 1231 EKLLDEHEALLHGAL-GEDFPPLARAVRDFDFTQA 1264