Pairwise Alignments

Query, 1306 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 514 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  261 bits (668), Expect = 9e-74
 Identities = 162/407 (39%), Positives = 228/407 (56%), Gaps = 15/407 (3%)

Query: 543 GTP---GGMVGVVVDISERKLMEEELRRARATAEEATEAKSLFLANMSHEIRTPMNAIIG 599
           GTP   GG V    DI++RK  E  L  A+  AEE    K+ FLA MSHEIRTPMN ++G
Sbjct: 110 GTPLPGGGFVTTYTDITDRKRAERMLIHAKDKAEETARLKANFLATMSHEIRTPMNGVLG 169

Query: 600 MAHLAMKTELTPKQRDYVGKIHNAAISLLGIINDILDFSKIEAGKLSLEYVPFSLEDVLD 659
           M HL   + LTP QRD++    ++A +LL IINDILDFSK+EAG++ LE   F L  +L+
Sbjct: 170 MLHLLTGSPLTPDQRDHLETAQSSARALLAIINDILDFSKLEAGQMKLEATKFDLHRLLE 229

Query: 660 NVSGLLGLKANEKGLELLFNVNAGTPAGLVGDPLRLNQILTNLVSNAIKFTERGQITLTT 719
            +  LL   A +KGL L   +    P    GDP RL Q+LTNL+ NA+KFTE+G + ++ 
Sbjct: 230 EMVALLKGAARDKGLTLSLRIADTVPRYQAGDPTRLRQVLTNLMGNAVKFTEKGDVAVSV 289

Query: 720 RPVDQAGDRVKLQFWIEDMGIGMSREQLLHLFQAFTQADGSTTRKYGGTGLGLSISRRLV 779
            P  +  D  +L+F + D GIG+       LF  F QAD S TR++GGTGLGLSI +RLV
Sbjct: 290 EP--EESDSSRLRFEVADTGIGIEPAAAPALFSEFVQADSSITRRFGGTGLGLSICKRLV 347

Query: 780 EMMGGTIWADSTLGEGSTFCFTAWFGRA---EELARPRTLPASLAGLRVLVADDNGAARE 836
           EMMGG I  DS  GEG+TF FT     A   ++          L  + VL+A+DN   ++
Sbjct: 348 EMMGGEIGFDSIPGEGTTFHFTLPLSAALPDQDSGAAEDAGPDLPPMAVLLAEDNPVNQK 407

Query: 837 ILGEALRHLDLRPDLVASGAEALAQLTEMQGGADPYRVLFLDWQMPDLDGVSTLHKLQ-Q 895
           +    L     R  L  +GAEA+A +       D + ++ +D  MP +DG+    +++  
Sbjct: 408 LTTTLLDRWGQRVTLARNGAEAIAAVAR-----DHFDLVLMDVHMPGIDGLEATRRIRAM 462

Query: 896 ALPQAQWPRVVMVTAYDQEELRRQTENLGICGILVKPVSASTLFDVL 942
           + P A+ P ++ +TA   +       + G+   + KPV  + L   L
Sbjct: 463 SGPVAKIP-IIAMTADVMDGDAALCLDAGMDDYVAKPVEPTRLLAAL 508



 Score =  106 bits (264), Expect = 6e-27
 Identities = 69/179 (38%), Positives = 97/179 (54%), Gaps = 23/179 (12%)

Query: 923  LGICGILVKPVSASTLFDVL--------------VSLVDADNAPATPLHIAAPQTRIDGM 968
            L IC  LV+ +     FD +               +L D D+  A     A P   +  M
Sbjct: 340  LSICKRLVEMMGGEIGFDSIPGEGTTFHFTLPLSAALPDQDSGAAED---AGPD--LPPM 394

Query: 969  RILLAEDNEINQQIAVELLQSMGAQVTVAGDGLQAVELLERSPDDSFDLVLMDLQMPHLD 1028
             +LLAEDN +NQ++   LL   G +VT+A +G +A+  + R   D FDLVLMD+ MP +D
Sbjct: 395  AVLLAEDNPVNQKLTTTLLDRWGQRVTLARNGAEAIAAVAR---DHFDLVLMDVHMPGID 451

Query: 1029 GYDATERLRCQQR-FAHLPILAMTAHAMPEERERCLAIGMNDHLAKPIDPTALAATLAR 1086
            G +AT R+R      A +PI+AMTA  M  +   CL  GM+D++AKP++PT L A L R
Sbjct: 452  GLEATRRIRAMSGPVAKIPIIAMTADVMDGDAALCLDAGMDDYVAKPVEPTRLLAALHR 510