Pairwise Alignments
Query, 1306 a.a., PAS domain S-box from Dechlorosoma suillum PS
Subject, 1329 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526
Score = 356 bits (914), Expect = e-102
Identities = 221/655 (33%), Positives = 375/655 (57%), Gaps = 27/655 (4%)
Query: 444 LQAIMDSMPNPVFFKDAEGRFLGCNRAYEDTFGVGRGQIVGKTVREL-PFLSEEEKQELQ 502
L A + P V D E R++ + + + + + + GK+ E+ +SEE K
Sbjct: 559 LNAFVTHAPAAVAMFDKEIRYIAYSNRWLEEYQLEGKDLYGKSHYEVFGTISEEWK---- 614
Query: 503 AVSEAIIRDGIMMHRELQLPFADGLRHDT-LYW-ANGFSREDGTPGGMVGVVVDISERKL 560
A+ ++ ++ + E + DG HD L W + DG+ GG++ + DI+E L
Sbjct: 615 AIHARCLKGEVISNEEDRWR-PDGWDHDQFLRWEVRPWHHYDGSIGGIMMLTQDITESCL 673
Query: 561 MEEELRRARATAEEATEAKSLFLANMSHEIRTPMNAIIGMAHLAMKTELTPKQRDYVGKI 620
EEL++A+ AE+A++AKS FLANMSHEIRTP+N +IG L +KT+L+ Q Y+ +
Sbjct: 674 QREELKKAKILAEQASKAKSEFLANMSHEIRTPLNGVIGFTDLVLKTDLSETQAQYLSIV 733
Query: 621 HNAAISLLGIINDILDFSKIEAGKLSLEYVPFSLEDVLDNVSGLLGLKANEKGLELLFNV 680
+ + +LL IINDILDFSKIEAGKL L+ L ++ + S ++ + ++KGLE+L N+
Sbjct: 734 NQSGNALLNIINDILDFSKIEAGKLELDIDRCDLYELTEQTSDIITYEVHKKGLEMLLNI 793
Query: 681 NAGTPAGLVGDPLRLNQILTNLVSNAIKFTERGQITLTTRPV--DQAGDRVKLQFWIEDM 738
+ P + D +R+ QI+ NL+ NA KFTE G+I L P+ D+A + ++F + D
Sbjct: 794 HPDIPRFIWVDSVRVKQIMVNLLGNASKFTEEGEIELQLYPIDKDEASREMVIRFSVRDT 853
Query: 739 GIGMSREQLLHLFQAFTQADGSTTRKYGGTGLGLSISRRLVEMMGGTIWADSTLGEGSTF 798
GIG+ E+ +F+AF+Q D STT+KYGGTGLGL+IS RL+++M + ST+G+GSTF
Sbjct: 854 GIGIKAEKQTKIFEAFSQEDVSTTKKYGGTGLGLTISNRLLQLMHSGLQLHSTVGKGSTF 913
Query: 799 CFTAWFGRAEELARPRTLPASLAGLRVLVADDNGAAREILGEALRHLDLRPDLVASGAEA 858
F E TL L+ VL+ DDN R I+ + + +G EA
Sbjct: 914 YFD--LNVKYEYGERITLEEDLSVENVLIVDDNDNNRMIIERMMALRGISTSQAKNGFEA 971
Query: 859 LAQLTEMQGGADPYRVLFLDWQMPDLDGVSTLHKLQQALPQAQWPRVVMVTAYDQEELRR 918
+ + E + + V+ +D+ MP ++G+ T+ K+++ + + P + + ++ D +++ +
Sbjct: 972 IQKFVE----GEKFDVVLMDYHMPYMNGIETIRKIREIVDRQ--PIIFLHSSSDDDKILK 1025
Query: 919 QTENLGICGILVKPVSASTLFDVLVSL-VDADNAPATPLHIAAPQTRI--DGMRILLAED 975
+ LG+ LVKP+ ++D L+S+ D AT +I P+ DG ++L+ ED
Sbjct: 1026 ACKELGVRKKLVKPIKLQEMYDALLSINKKQDYRKATDQNIDLPKNLFPNDG-KVLIVED 1084
Query: 976 NEINQQIAVELLQSMGAQVTV--AGDGLQAVELLERSPDDSFDLVLMDLQMPHLDGYDAT 1033
N IN +A ++ ++ + A +G +A+E+++ D+ ++ MD+QMP ++GY+AT
Sbjct: 1085 NTINMLLAKTVIHNLSPATAILEAANGKEALEVMK---DELPSVIFMDVQMPEMNGYEAT 1141
Query: 1034 ERLRCQQRFAHLPILAMTAHAMPEERERCLAIGMNDHLAKPIDPTALAATLARWY 1088
+ +R + ++ I+A+TA + ERE+C+ GMND +AKP + + +W+
Sbjct: 1142 QAIRKKYNKHNILIIALTAGNIKGEREKCMQAGMNDFIAKPFVEEDVIKLMEKWH 1196
Score = 41.6 bits (96), Expect = 5e-07
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 20/181 (11%)
Query: 459 DAEGRFLGCNRAYEDTFGVGRGQIVGKTVRELPFLSEEE--KQELQAVSEAIIRDGIMMH 516
D EG FL N+A ++ G +G++VGK++ ++ L KQ L+ + + G M
Sbjct: 181 DLEGNFLMANKASANSLGFHKGELVGKSLSDVIPLQYHGSLKQYLKYIRQNGNSQGTM-- 238
Query: 517 RELQLPFADGLRHDTLYWANGFSREDGTPGGMVGVVVDISERKLMEEELRRARATAEEAT 576
+ DG LY + + GTP ++G +DI+ER +E E R + E+
Sbjct: 239 ---HVQHKDGSIRIWLYSNILLNDQAGTP-YVLGNALDITERHRLEREYNRLKEMLEQTN 294
Query: 577 EA------------KSLFLANMSHEIRTPMNAIIGMAHLAMKTELTPKQRDYVGKIHNAA 624
++ +N++ EI + I A+ K R+ + K A
Sbjct: 295 SVARVGGWEIDLLKNEIYWSNVTREIHEVGDDFIPNTEKAIGFYKEGKHREAIQKAFENA 354
Query: 625 I 625
I
Sbjct: 355 I 355
Score = 28.9 bits (63), Expect = 0.003
Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 26/195 (13%)
Query: 411 TLQDATLRLEERVEQ-RTRELADAREESSRQLVLLQAIMDSMPNPVFFKDAEGRFLGCNR 469
T QD T++ +E ++++L + + +S ++ ++ D EG N+
Sbjct: 396 TFQDITVQKMAEMEIIKSKKLLEDVQNASSEVSIIST------------DTEGIITVFNK 443
Query: 470 AYEDTFGVGRGQIVGKTVRELPFLSEEEKQELQAVSEAIIRD----GIMMH--------- 516
E G ++VGK + +E K+ + +S+ + + +H
Sbjct: 444 GAEKMLGYTAEEMVGKQTPAVIHEPKEVKERSKVLSKQYEKPIEGFRVFVHKSELDGAEE 503
Query: 517 RELQLPFADGLRHDTLYWANGFSREDGTPGGMVGVVVDISERKLMEEELRRARATAEEAT 576
RE DG R E G G +G+ DI++RK E+ L +A
Sbjct: 504 REWTYIRKDGSRLAVSLAVTTMRHESGKITGYLGMATDITKRKKAEKALTIEKARLNAFV 563
Query: 577 EAKSLFLANMSHEIR 591
+A EIR
Sbjct: 564 THAPAAVAMFDKEIR 578