Pairwise Alignments

Query, 434 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 375 a.a., ABC transporter for branched-chain amino acids, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score =  195 bits (495), Expect = 2e-54
 Identities = 123/343 (35%), Positives = 169/343 (49%), Gaps = 4/343 (1%)

Query: 45  TVKIGHASPLTGPQAHIGKDNEYGATLAIEELNAKGLEIGGAKVKFELISDDDQADPKQG 104
           T+KIG A P TGP    G     GA  AI ++NAKG   G      E    DD  DPKQ 
Sbjct: 29  TIKIGIAGPKTGPVTQYGDMQFMGAKQAIADINAKG---GVDGKMLEAKEYDDACDPKQA 85

Query: 105 TTVAQKFVDAKVNGVIGHLNSGTTIPASKIYFDAGIPQISGSATNPTYTKQGFATAFRVM 164
             VA K V+  V  V+GHL S +T PAS IY D G+  I+ +AT+P  T +G+   FR +
Sbjct: 86  VAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATSPEITARGYKLIFRTI 145

Query: 165 ANDEQQGKALAQFAAKTLAAKSVAIIDDRTAYGQGLADEFKKAAEAAGLKVVASEYTNDK 224
             D  QG A   + A  +  K VA++ D+  YG+G+A   K+  E  G KV   E  N  
Sbjct: 146 GLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGEGIATAVKQTLEKKGTKVAVFEGLNAG 205

Query: 225 ATDFKAILTKIKSKKPDLIFYGGMDPQGGPMAKQMKELGLKAKFLTGDGGCTPNFITLAG 284
             DF +I+ K+K    D ++YGG  P+ G + +Q KE GL AKF+  +G    +   +A 
Sbjct: 206 DKDFSSIIQKLKQANVDFVYYGGYHPELGLILRQAKEKGLNAKFMGPEGVGNDSISQIAQ 265

Query: 285 AAAEGQYCSLPGVPLDKMPGGTVFKDKFVGKFKTEIQLYAPYVYDATMVLVDAMKRANSV 344
            A+EG   +LP    D  P      ++F    +     +    Y A  V+   +K A S 
Sbjct: 266 GASEGLLVTLP-KSFDTDPANKAIVEEFAKNKQDPTGPFVFPAYSAIEVIAGGIKAAKSE 324

Query: 345 EPAKYLPEIGKTSFQGVTAKIGFDEFGDLKDGAISFYEYKGGK 387
           + AK    I   +F+  T  + FD  GDLKD     YE+  GK
Sbjct: 325 DTAKVAEAIHAGTFKTPTGDLSFDAKGDLKDFKFVVYEWHFGK 367