Pairwise Alignments
Query, 482 a.a., tetratricopeptide repeat protein from Dechlorosoma suillum PS
Subject, 1246 a.a., Photosystem I assembly protein Ycf3 from Azospirillum sp. SherDot2
Score = 179 bits (455), Expect = 4e-49
Identities = 175/486 (36%), Positives = 221/486 (45%), Gaps = 30/486 (6%)
Query: 12 ARAERRYHQGIACLEAGQGEEAEAHLRQALALAPQLTRARANLGYVLEERGAWAEAEAAY 71
A AE G A + + EA H R+AL L + A ANLG +L + +AEAE A
Sbjct: 113 AYAEAHNSLGSALQDQDRLAEAGVHYRRALDLNARYAEAWANLGTLLRAQDDYAEAETAL 172
Query: 72 RRALAEDPGLGPVWLNLGGLLLSRGRAEEALPVCLQTLSLLPGAAAAWVNLGAACICLED 131
R AL DPG NLG +L GR EA L L L PG A VNL
Sbjct: 173 RHALRLDPGHATALTNLGVVLKETGRPAEAEAAHLGALRLAPGDAETMVNLALLREAQGR 232
Query: 132 FAQGERCLLKALSLEPDRPSAHINLAYLLLRQGRYEAGWECFEARPWYRELAAHAHCP-- 189
+ E +AL P A NLA LL +GR GWE +EAR R ++A
Sbjct: 233 GDEAEALYAQALIHAPGFALARWNLALRLLGRGRLADGWEEYEARFASRRVSAGRSFSLP 292
Query: 190 ---RWHGEAPAGRHLLVLCEAGHGDMIQFCRYLPLLRARGARLSLVCQ--PALVRLFA-A 243
W + GR LLV E G GD + F LP L R LV + L L A
Sbjct: 293 AFSEWTWDGAPGRRLLVWREQGLGDELMFGTALPDLAERFGPEMLVVEVDARLTGLVGRA 352
Query: 244 LPGVERVIPLAD-------LPA-ARGDWDAWVPLMSLPRHFATRVDSIPAALPYLQVGAP 295
LPG AD PA A D DA +P+ SLP+ + + PA +L
Sbjct: 353 LPGATVRAQTADPAPAPAPAPAPAPADADAHLPMGSLPQLLRSGLADFPARPSWLAPDPL 412
Query: 296 ERQAWRLRLPAAG--LRVGLAWRGNPRFENDGERSLPGLWTLAPLAAVPGIALVSLQKG- 352
WR RL A G LRVGL W G+ + + S L APL +PG+ V+LQ
Sbjct: 413 RLAEWRDRLAALGPGLRVGLCW-GSQNMLGERKASYTTLAGWAPLLTLPGLIPVTLQYDG 471
Query: 353 -EAEEEALWTPAGMRIAAL-GSEL-TDFADTAALIANLDLVIAVDTAVAHLAAALGVACW 409
EAE A+ G+RI G++L D AALIA LDLV+ V ++V +A ALGV W
Sbjct: 472 REAEIAAVEAQLGLRIRRWPGTDLKNDLEGVAALIAGLDLVVTVASSVGEMAGALGVPVW 531
Query: 410 LLLPRYKTDWRWLEGRQDSPWYPGVMRLFRQERRGDWDEVVSRVAGELAAWADGATPDSG 469
P DW L G PW+P MRL+ +V++R+A EL A P +
Sbjct: 532 RFGP--AGDWTAL-GTGVRPWFPS-MRLWSARPGEGLPDVLARMAAELRRL---APPPAL 584
Query: 470 TPALEV 475
PAL++
Sbjct: 585 PPALQI 590
Score = 158 bits (399), Expect = 1e-42
Identities = 150/453 (33%), Positives = 188/453 (41%), Gaps = 25/453 (5%)
Query: 21 GIACLEAGQGEEAEAHLRQALALAPQLTRARANLGYVLEERGAWAEAEAAYRRALAEDPG 80
G+A L + EA AHLR AL P NL LE G A A A+ R + PG
Sbjct: 799 GLAALALDRPAEAVAHLRLALQGRPGDLATLGNLALALERAGDGAAAGLAWWRVILFAPG 858
Query: 81 LGPVWLNLGGLLLSRGRAEEALPVCLQTLSLLPGAAAAWVNLGAACICLEDFAQGERCLL 140
G W L L +GR + AL + L+L PG A N G A + +
Sbjct: 859 TGAGWAGLADLRQRQGRLDAALKGWGRALALEPGRAEWRYNQGNALHAAGRPVEADAAYR 918
Query: 141 KALSLEPDRPSAHINLAYLLLRQGRYEAGWECFEARPWYRELA--AHAHCPRWHGEAPAG 198
+A+ +P A N Y L QG AGW EAR + P W G G
Sbjct: 919 QAVEDDPALTLAAFNRGYAALAQGDLAAGWTGLEARFAAGQALPDRRFRMPAWEGGELTG 978
Query: 199 RHLLVLCEAGHGDMIQFCRYLPLLRAR----GARLSLVCQPALVRLFAALPGVERVIPLA 254
+ LLV E G GD + P L AR R+ + C+P L LFA R P A
Sbjct: 979 KTLLVWREQGVGDELMHSACYPDLIARTLSGAGRVIVECEPRLAALFA------RSFPQA 1032
Query: 255 DLPAAR---GDWDAWVPLMSLPRHFATRVDSIPAALPYLQVGAPERQAWRLRLPAAG--L 309
+ AA D D VP SLP ++S +L+ + WR L G L
Sbjct: 1033 TVRAATEDPADADCHVPAGSLPLQLGWGLESFATQGGWLRADEAAVERWRGWLGGTGSAL 1092
Query: 310 RVGLAWRGNPRFENDGERSLPGLWTLAPLAAVPGIALVSLQKGEAEEEALWTPAGMRIAA 369
VGL WR R P L AP+ +PG+ L++LQ E E E IA
Sbjct: 1093 TVGLCWRSGLRGALRDANYAP-LTDWAPILTLPGLRLITLQYDECEAELADAERRFGIAI 1151
Query: 370 LGSEL---TDFADTAALIANLDLVIAVDTAVAHLAAALGVACWLLLPRYKTDWRWLEGRQ 426
L D AAL A LDLVI+ T+VA +A ALGV W + P DW L G
Sbjct: 1152 HRPPLDLKNDLDGAAALTAALDLVISAGTSVAEMAGALGVPVWRIGP--AGDWTAL-GTG 1208
Query: 427 DSPWYPGVMRLFRQERRGDWDEVVSRVAGELAA 459
PWYP MRL E+ G + + LA+
Sbjct: 1209 CRPWYPS-MRLVCPEQGGTLGDALGAAGRALAS 1240
Score = 82.4 bits (202), Expect = 8e-20
Identities = 95/298 (31%), Positives = 124/298 (41%), Gaps = 31/298 (10%)
Query: 8 ASAAARAERRYHQGIACLEAGQGEEAEAHLRQALALAPQLTRARANLGYVLEERGAWAEA 67
A+ A+ + G+ + GQ +A + QA+A P + ANLG L G AEA
Sbjct: 41 AADGRNADALHLLGVLHHQRGQDADAVRLIGQAVARRPGVADQHANLGLALHALGRLAEA 100
Query: 68 EAAYRRALAEDPGLGPVWLNLGGLLLSRGRAEEALPVCLQTLSLLPGAAAAWVNLGAACI 127
EA YRRALA +LG L + R EA + L L A AW NLG
Sbjct: 101 EAEYRRALALRDAYAEAHNSLGSALQDQDRLAEAGVHYRRALDLNARYAEAWANLGTLLR 160
Query: 128 CLEDFAQGERCLLKALSLEPDRPSAHINLAYLLLRQGRYEAGWECFEARPWYRELAAHAH 187
+D+A+ E L AL L+P +A NL +L G RP E AAH
Sbjct: 161 AQDDYAEAETALRHALRLDPGHATALTNLGVVLKETG-----------RPAEAE-AAHLG 208
Query: 188 CPRW-HGEAPAGRHLLVLCEA-GHGDMIQFCRYLPLLRARGARLSLVCQPALVRLFAALP 245
R G+A +L +L EA G GD + L+ A G L A L L
Sbjct: 209 ALRLAPGDAETMVNLALLREAQGRGDEAEALYAQALIHAPGFAL------ARWNLALRLL 262
Query: 246 GVERVIPLADLPAARGDWDAWVPLMSLPRHFATRVDSIPAALPYLQVGAPERQ--AWR 301
G R LAD W+ + + R A R S+PA + GAP R+ WR
Sbjct: 263 GRGR---LAD------GWEEYEARFASRRVSAGRSFSLPAFSEWTWDGAPGRRLLVWR 311
Score = 67.0 bits (162), Expect = 4e-15
Identities = 55/165 (33%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 2 TLPPISASAAARAERRYHQGIACLEAGQGEEAEAHLRQALALAPQLTRARANLGYVLEER 61
TL + +A A+R + +A E G +AEA + A ALAP+ A NLG + R
Sbjct: 645 TLLTRAIAAEPSADRHKRRALARQEMGALADAEADWQAAAALAPEDVEALGNLGALRLSR 704
Query: 62 GAWAEAEAAYRRALAEDPGLGPVWLNLGGLLLSRGRAEEALPVCLQTLSLLPGAAAAWVN 121
GA AEA A A P +W+N G L + P ++ L+L P A AW
Sbjct: 705 GAAAEAMEATDAARRLAPFHAGLWINAG--LARQAMGGAGRPFLMRALALDPAVAEAWTA 762
Query: 122 LGAACICLED-FAQGERCLLKALSLEPDRPSAHINLAYLLLRQGR 165
L A + D A+ ER + L L P P+A NL L R
Sbjct: 763 LSAEALRNPDRAAEAERTARRTLHLRPGDPAAVSNLGLAALALDR 807
Score = 42.4 bits (98), Expect = 9e-08
Identities = 62/198 (31%), Positives = 81/198 (40%), Gaps = 24/198 (12%)
Query: 13 RAERRYHQGIACLEAGQGEEAEAHLRQALALAPQLTRARANLGYVLEERGAWA------E 66
RAE RY+QG A AG+ EA+A RQA+ P LT A N GY +G A E
Sbjct: 893 RAEWRYNQGNALHAAGRPVEADAAYRQAVEDDPALTLAAFNRGYAALAQGDLAAGWTGLE 952
Query: 67 AEAAYRRALAEDPGLGPVWLN---LGGLLL---SRGRAEEAL-PVCLQTL--SLLPGAAA 117
A A +AL + P W G LL +G +E + C L L GA
Sbjct: 953 ARFAAGQALPDRRFRMPAWEGGELTGKTLLVWREQGVGDELMHSACYPDLIARTLSGAGR 1012
Query: 118 AWVNLGAACICLEDFAQG-ERCLLKALSLEPDRPSAHINLAYLLLRQGRYEAGWECFEAR 176
V L FA+ + ++A + +P H+ L L+ G G E F +
Sbjct: 1013 VIVECEPRLAAL--FARSFPQATVRAATEDPADADCHVPAGSLPLQLG---WGLESFATQ 1067
Query: 177 -PWYRELAAHAHCPRWHG 193
W R A A RW G
Sbjct: 1068 GGWLR--ADEAAVERWRG 1083