Pairwise Alignments

Query, 482 a.a., tetratricopeptide repeat protein from Dechlorosoma suillum PS

Subject, 640 a.a., Photosystem I assembly protein Ycf3 from Azospirillum sp. SherDot2

 Score =  281 bits (720), Expect = 4e-80
 Identities = 189/479 (39%), Positives = 241/479 (50%), Gaps = 52/479 (10%)

Query: 25  LEAGQGEEAEAHLRQALALAPQLTRARANLGYVLEERGAWAEAEAAYRRALAEDPGLGPV 84
           L AG+  +A A  R A+AL P   +A  NLG         A+A AAYRRAL   P     
Sbjct: 163 LLAGRLADARAAYRAAVALEPATVQAYVNLGATASREKNHAQAAAAYRRALRLSPDHPGA 222

Query: 85  WLNLGGLLLSRGRAEEALPVCLQTLSLLPGAAAAWVNLG---------------AACIC- 128
           W NL   +      + A+  C ++++L P     + NLG               AA +C 
Sbjct: 223 WNNLASAVWELNDGQGAVRFCRRSVALKPDHPDPYANLGYVQRSQARNGDDFAEAATLCR 282

Query: 129 ----------------------LEDFAQGERCLLKALSLEPDRPSAHINLAYLLLRQGRY 166
                                 L    + ER   + L+ EP  P A  NL+  LL+ GR 
Sbjct: 283 RALRVNPSHVSALNNLGIVNLDLGQLDEAERLFNRTLAAEPKHPDARFNLSLALLKAGRL 342

Query: 167 EAGWECFEARPWYREL-AAHAHCPRWHGEAPAGRHLLVLCEAGHGDMIQFCRYLPLLRAR 225
           + GW+ +EAR    +L   +     W GE   G  +L+  E GHGD + F RY PL+ A+
Sbjct: 343 KEGWDHYEARWETGQLPTVNGQLRAWQGEPLNGATILLHAEQGHGDTLHFVRYAPLVAAQ 402

Query: 226 GARLSLVCQPALVRLFAALPGVERVIPLADLPAARGDWDAWVPLMSLPRHFATRVDSIPA 285
           G R+ L  QP+L RL A +PGV  V  L D P  + ++    PLMSLPR   T + +IP 
Sbjct: 403 GGRVVLAVQPSLKRLVAGMPGVAAVHALTD-PFPKPEFHC--PLMSLPRLLGTELGTIPG 459

Query: 286 ALPYLQVGAPERQAWRLR-LPAAGLRVGLAWRGNPRFE------NDGERSLPGLWTLAPL 338
           A+PYL   A     W  + LP AGLRVGL W G+PR         D  RS+  L  LAPL
Sbjct: 460 AIPYLYPPAEAIGKWLGQPLPGAGLRVGLVWSGDPRPGLLRANLTDRRRSM-SLHDLAPL 518

Query: 339 AAVPGIALVSLQKGEAEEEALWTPAGMRIAALGSELTDFADTAALIANLDLVIAVDTAVA 398
           A VP +  V+LQ G    +    PAGM I      +TDFADTAAL+  LDLVI VDT+VA
Sbjct: 519 AEVPDLRFVNLQMGGPAAQLTEPPAGMDIHDPMGAITDFADTAALVMRLDLVITVDTSVA 578

Query: 399 HLAAALGVACWLLLPRYKTDWRWLEGRQDSPWYPGVMRLFRQERRGDWDEVVSRVAGEL 457
           HL  ALG   W ++ RY   WRWL+ R D+PWYP  MRLFRQ   GDW  V+ RVA  L
Sbjct: 579 HLVGALGKPVW-VMSRYDGCWRWLQDRDDTPWYP-TMRLFRQTAPGDWTTVIRRVADAL 635



 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 6/139 (4%)

Query: 30  GEEAEAHLRQALALAPQLTRARANLGYVLEER---GAWAEAEAAYRRALAEDPGLGPVWL 86
           G+ A A L +   L P      + L  V + R   G  A+A AAYR A+A +P     ++
Sbjct: 134 GDNAPALLERFCRLRPATA---SELLAVADSRLLAGRLADARAAYRAAVALEPATVQAYV 190

Query: 87  NLGGLLLSRGRAEEALPVCLQTLSLLPGAAAAWVNLGAACICLEDFAQGERCLLKALSLE 146
           NLG          +A     + L L P    AW NL +A   L D     R   ++++L+
Sbjct: 191 NLGATASREKNHAQAAAAYRRALRLSPDHPGAWNNLASAVWELNDGQGAVRFCRRSVALK 250

Query: 147 PDRPSAHINLAYLLLRQGR 165
           PD P  + NL Y+   Q R
Sbjct: 251 PDHPDPYANLGYVQRSQAR 269



 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 48/168 (28%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 21  GIACLEAGQGEEAEAHLRQALALAPQLTRARANLGYVLEERGAWAEAEAAYRRALAEDPG 80
           G+  L+AG  E A   LR+AL +       R +LG      G   +A   YR AL  +P 
Sbjct: 60  GVTALQAGAAEAASRWLRRALVVDRAQAYYRNSLGEAFRALGRPDKAREQYRLALTLNPA 119

Query: 81  LGPVWLNL---------GGLLLSR----------------------GRAEEALPVCLQTL 109
                 NL            LL R                      GR  +A       +
Sbjct: 120 YPESLANLHRQPLPGDNAPALLERFCRLRPATASELLAVADSRLLAGRLADARAAYRAAV 179

Query: 110 SLLPGAAAAWVNLGAACICLEDFAQGERCLLKALSLEPDRPSAHINLA 157
           +L P    A+VNLGA     ++ AQ      +AL L PD P A  NLA
Sbjct: 180 ALEPATVQAYVNLGATASREKNHAQAAAAYRRALRLSPDHPGAWNNLA 227