Pairwise Alignments

Query, 360 a.a., Holliday junction DNA helicase, RuvB subunit from Dechlorosoma suillum PS

Subject, 343 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Xanthobacter sp. DMC5

 Score =  418 bits (1074), Expect = e-121
 Identities = 209/336 (62%), Positives = 261/336 (77%), Gaps = 2/336 (0%)

Query: 17  RLIGAESKSAQEEAIERALRPKRLADYVGQAKIREQLSIFIHAAKRRSEALDHVLLFGPP 76
           RL+  E +   ++A +  LRP+ L+++VGQA+ R  L IFI AA+ R EALDHVL  GPP
Sbjct: 4   RLLSGEKRG--DDAADSTLRPQLLSEFVGQAQARANLEIFIKAARARGEALDHVLFVGPP 61

Query: 77  GLGKTTLAHIVAAEMGVNLRQTSGPVLERAGDLAAILTNLEPHDVLFIDEIHRLSPVVEE 136
           GLGKTTLA I++ EMGV  R TSGPV+ +AGDLAAILTNLE  DVLFIDEIHRLSP VEE
Sbjct: 62  GLGKTTLAQIMSREMGVGFRSTSGPVIAKAGDLAAILTNLEERDVLFIDEIHRLSPAVEE 121

Query: 137 ILYPALEDFQIDIMIGEGPAARSVKLDLPPFTLVGATTRAGMLTNPLRDRFGIVARLEFY 196
           ILYPA+ED+++D++IGEGPAARSVK+ LP FTLVGATTR+G+LT PLRDRFGI  RL+FY
Sbjct: 122 ILYPAMEDYELDLVIGEGPAARSVKISLPKFTLVGATTRSGLLTTPLRDRFGIPVRLQFY 181

Query: 197 NAQELTHIVTRSAQLLNVAIEPEGALEIARRSRGTPRIANRLLRRVRDYAEVKADGIITR 256
             +EL  IV R A+++ +AI P+GA EIARR+RGTPRIA RLLRRVRD+A V     I R
Sbjct: 182 TVEELEKIVVRGARVMGIAIAPDGATEIARRARGTPRIAGRLLRRVRDFALVAEAERIDR 241

Query: 257 EVADAALSMLDVDHGGLDLMDRKLLSAVIDKFAGGPVGVDNLAAAIGEARDTIEDVLEPY 316
           ++AD AL  L+VD  GLD MDR+ L+ + + + GGPVGVD LAAA+ E RD IE+++EP+
Sbjct: 242 KIADRALLALEVDAAGLDAMDRRYLTVIAEFYGGGPVGVDTLAAALSEPRDAIEEIVEPF 301

Query: 317 LIQQGYLQRTPRGRIATPAIYRHLGLEAPGTPAATP 352
           L+QQG++QRTPRGR+ T A +RHLGL  P +    P
Sbjct: 302 LVQQGFIQRTPRGRMLTGAAFRHLGLAEPPSVKQMP 337