Pairwise Alignments

Query, 360 a.a., Holliday junction DNA helicase, RuvB subunit from Dechlorosoma suillum PS

Subject, 440 a.a., recombination factor protein RarA from Pseudomonas simiae WCS417

 Score = 47.8 bits (112), Expect = 6e-10
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 8/116 (6%)

Query: 35  LRPKRLADYVGQAKIREQLSIFIHAAKRRSEALDHVLLFGPPGLGKTTLAHIVAAEMGVN 94
           LR   L +YVGQ  +  +      A ++   AL  ++ +GPPG+GKTTLA ++A     +
Sbjct: 17  LRSTNLDEYVGQEHLLARGKPLREALEQG--ALHSMIFWGPPGVGKTTLARLLAKVSDAH 74

Query: 95  LRQTSGPV-----LERAGDLAAILT-NLEPHDVLFIDEIHRLSPVVEEILYPALED 144
               S  +     + +A ++A           +LF+DE+HR +   ++   P +ED
Sbjct: 75  FETVSAVLAGVKEIRQAVEVAKQQAGQYGKRTILFVDEVHRFNKSQQDAFLPYVED 130