Pairwise Alignments

Query, 384 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

Subject, 384 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score =  207 bits (528), Expect = 3e-58
 Identities = 131/357 (36%), Positives = 187/357 (52%), Gaps = 8/357 (2%)

Query: 3   TIPSFALLAATAMVLASCGKEAPKAPEP---RPALTQVVGAAGQS-DMLWVGEVRARYET 58
           T+   A++A    +LASC +E  KA  P   RP     +GA  +   +++ G V+AR E 
Sbjct: 11  TVLKIAVVAGALSLLASCSEEK-KAEAPDVVRPVKVAEIGAPDEGRKLIYSGAVKARTEM 69

Query: 59  DQGFRIGGKVVERKVDIGAVVKKGQILARLDPVDAGLSAAAANAQTKAAEADFLVAKAEY 118
           + GF + GK+ ER V++G  V  G +LARLDPVD  L+   A A   +A     +    Y
Sbjct: 70  NLGFHVSGKITERLVNVGDHVSPGAVLARLDPVDYKLAVTRAEADLSSARKQVEITDLAY 129

Query: 119 ERQKKLLEKQFISQSAFDSREAQFKAALARLDQARAQAAVTGNQAGYTDLVAEKDGVVTD 178
            R + L  +   SQSA +        A++    A +      NQ  Y+DL +++ G+VT 
Sbjct: 130 RRAQTLAAQNATSQSALEQASLSRDQAVSSRQSAESALEQARNQVAYSDLKSDQKGIVTT 189

Query: 179 VKVEPGQVVSAGQPAIRLALAGDKEVVVAVPEGRMKGIEPGTSAVIRLWANQDQSYAARV 238
           V  + GQVVSAG P + +A+ G+KEV +AVPE  +   +PG       WA        +V
Sbjct: 190 VSADVGQVVSAGTPVVTVAVDGEKEVQIAVPEMDVSHFQPGKQVSASFWAANTIVLTGKV 249

Query: 239 REVAPAADAATRSFQVKVTVLEPDAGLRLGMTAGV--LIGSAEAPLLVPTAALTRQDGKN 296
           REVA +AD  +R+F V+V++ E D  + LGMTA +     +A     VP AAL  +DGK 
Sbjct: 250 REVAQSADPQSRTFSVRVSLPE-DQRVLLGMTATIEAKADNAVPAFSVPLAALGEKDGKK 308

Query: 297 TVWVVNPQSGEVQPRSVTTGPFREDGVVVEKGLARGERVVIAGVHKLQPGQLVRAVE 353
            VWVV+ Q G V  R V    F +DG  + KGL+ G  VV AG   ++    VR  E
Sbjct: 309 VVWVVDRQKGTVSSRPVEVVDFSDDGARISKGLSTGVLVVSAGTQFMREDMKVRLPE 365