Pairwise Alignments

Query, 384 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

Subject, 358 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score =  172 bits (436), Expect = 1e-47
 Identities = 123/352 (34%), Positives = 173/352 (49%), Gaps = 5/352 (1%)

Query: 1   MKTIPSFALLAATAMVLASCGKEAPKAPEPRPALTQVVGAAGQSDM--LWVGEVRARYET 58
           MKTI   A L      LASC  E P A +P   +  V       D   +  GEVRAR +T
Sbjct: 1   MKTILIAAALGGI-FALASCSSEEPPAEKPLRTVDVVAAEKKPVDRGSVITGEVRARVQT 59

Query: 59  DQGFRIGGKVVERKVDIGAVVKKGQILARLDPVDAGLSAAAANAQTKAAEADFLVAKAEY 118
           D  FR+ GK++ER VD+GA VK GQ+LAR+DP +       A A  ++AEA    A+  +
Sbjct: 60  DLSFRVSGKIIERLVDVGARVKTGQLLARIDPEEQKADIDVALANLQSAEAQQTQAQLTF 119

Query: 119 ERQKKLLEKQFISQSAFDSREAQFKAALARLDQARAQAAVTGNQAGYTDLVAEKDGVVTD 178
           +RQ+ L + Q  S+SA D  +         +  A+AQ     +   YT+L A+ DGV+T 
Sbjct: 120 DRQQNLFKTQVTSRSAVDKAQETLLTTQGAVRSAQAQLDTARDALSYTELRADADGVITA 179

Query: 179 VKVEPGQVVSAGQPAIRLALAGDKEVVVAVPEGRMKGIEPGTSAVIRLWANQDQSYAARV 238
             VE GQV  A Q    LA  G ++ V  V E      +      + L ++  Q  AA V
Sbjct: 180 RNVEVGQVAQAAQLVFTLAHDGPRDAVFDVYESLFLERDIDNLVNVSLLSDPAQIVAAPV 239

Query: 239 REVAPAADAATRSFQVKVTVLEPDAGLRLGM-TAGVLIGSAEAPLLVPTAALTRQDGKNT 297
           RE++P  D    + +VKV  L  D  + LG   +G         + +P +A+  QDG   
Sbjct: 240 REISPTIDPDNGTIRVKVG-LNGDMTMPLGAPVSGHFRFRQIDAIELPWSAMASQDGAPA 298

Query: 298 VWVVNPQSGEVQPRSVTTGPFREDGVVVEKGLARGERVVIAGVHKLQPGQLV 349
           VW+V+P+S EV  R V    +     VV +GL  G+ VV  G   L+ G+ V
Sbjct: 299 VWLVDPRSSEVAMRPVQVADYETGQFVVTEGLNPGDLVVTVGTKFLRAGEKV 350