Pairwise Alignments

Query, 384 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

Subject, 361 a.a., efflux protein from Agrobacterium fabrum C58

 Score =  191 bits (485), Expect = 3e-53
 Identities = 122/345 (35%), Positives = 185/345 (53%), Gaps = 4/345 (1%)

Query: 10  LAATAMVLASCGKEAPKAPE-PRPALTQVVGAAGQSDMLWVGEVRARYETDQGFRIGGKV 68
           L   A+ L+SC ++   A E PRP L+ VV       +   G V +R +TD GFR+ G++
Sbjct: 10  LLIPAIALSSCQEKQEAAAEAPRPVLSVVVEEKLADALRLTGTVESRIKTDLGFRVLGRI 69

Query: 69  VERKVDIGAVVKKGQILARLDPVDAGLSAAAANAQTKAAEADFLVAKAEYERQKKLLEKQ 128
           + R VD+  +VKKG ++A +DP+   LS  +A +    AEA    A    +RQ+ L E +
Sbjct: 70  IARNVDVADLVKKGDVVASIDPLALELSVKSAQSDLSNAEAQLANAVTTEQRQRVLAEAR 129

Query: 129 FISQSAFDSREAQFKAALARLDQARAQAAVTGNQAGYTDLVAEKDGVVTDVKVEPGQVVS 188
             +++A +  E   + A A + +ARA       Q GY  L AE DGVVT    E GQVVS
Sbjct: 130 SGTEAALEEAEQAMRTANAAVAKARANLDKAEEQLGYAQLRAEFDGVVTATSGEIGQVVS 189

Query: 189 AGQPAIRLALAGDKEVVVAVPEGRMKGIEPGTSAVIRLWANQDQSYAARVREVAPAADAA 248
           AGQ  + +A    ++VVV VP+   + +E G++  I L  +        VRE+AP A+ A
Sbjct: 190 AGQTVVTIARPEVRDVVVDVPQFAAQRLEIGSTFEIALQLDPKIHMTGVVREIAPEAETA 249

Query: 249 TRSFQVKVTVLEPDAGLRLG-MTAGVLIGSAEAPLLVPTAALTRQDGKNTVWVVNPQSGE 307
           TR+ + K+++ +     RLG +   + + ++E  + +P +AL + D    VW+VN  +  
Sbjct: 250 TRTRRTKISLQDAPQAFRLGSVVTALALAASEPQITLPASALLKTDSGWGVWIVNADTAT 309

Query: 308 VQPRSVTTG--PFREDGVVVEKGLARGERVVIAGVHKLQPGQLVR 350
           V  R VT    P     V +  G+  GERV  AGVHKL+ GQ +R
Sbjct: 310 VTYRPVTIDGEPAEGGSVRITGGIKPGERVASAGVHKLKDGQAIR 354