Pairwise Alignments

Query, 512 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 563 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  142 bits (359), Expect = 2e-38
 Identities = 84/264 (31%), Positives = 128/264 (48%), Gaps = 1/264 (0%)

Query: 244 IFIGLLRDVTERKNAEMKLMENAAALQQYYDQAEEENQLAARLLDKQMLRPGLQDSHVHY 303
           I    +R +   +  +  ++E    + +++     E ++A  + DK      L   ++ Y
Sbjct: 115 ILAAKIRAMDRLRRLQATVLEQRDQITRHHHHLLNEQRVAKAVFDKVAHSGCLSAPNIRY 174

Query: 304 WLSAAKNFSGDVVAATRTPDGSLVALLADATGHGLTAAISTLPLLTVFYGMANRGLPLES 363
             S    F+GD++ A  TP G +  LL D TGHGL AA+  +P+  VFYGM  +G  +  
Sbjct: 175 LQSPYALFNGDLMLAAFTPAGDMRVLLGDFTGHGLPAAVGAMPMAEVFYGMTAKGYGMAQ 234

Query: 364 MVGEMNRHLKASLPTGHFVAANVVLLDPATGTGQAWCGGMPESLLLDGDGEVVRTFASRH 423
           ++ EMN  LK  LP   F  A ++ L    G+ + W GGMP+   L  DG+V+   +SRH
Sbjct: 235 ILREMNAKLKRILPVDMFCCALLLNLSMQRGSVEVWNGGMPDGYRLSVDGQVLSALSSRH 294

Query: 424 LPFGILGTDEFEASIDTFPCTPGHQLMLYSDGFKEAEGKNGAQLGHAGLREILRGVPPEQ 483
           LP GIL  + F+ S +  P  PG +L+L SDG  +         G   LR +L       
Sbjct: 295 LPLGILAAERFDDSTEVLPLAPGERLLLLSDGVIDTADDQECLFGVQRLRAVLADNRDPV 354

Query: 484 RLTALQQALAEHLAGSPAQDDISV 507
           +L        E   G P +DDIS+
Sbjct: 355 KLFDELMLALERFGGQP-RDDISL 377



 Score =  122 bits (306), Expect = 3e-32
 Identities = 65/134 (48%), Positives = 90/134 (67%)

Query: 8   LRILVADDSPSIRQILLALLGRQGHQVIAAEDGQQALDLFHRHQPDLLLLDIMMPVLDGM 67
           L +LVA+DS   R +L  ++ RQGHQV  AE+G+QA+ L+   +P L+LLD +MPV+DG 
Sbjct: 7   LTVLVAEDSAVDRLLLAQIVRRQGHQVFTAENGEQAVALYLERRPQLVLLDALMPVMDGF 66

Query: 68  EVARRIRAEKLDRWVPIIFLSALDRRENLVAGLEAGGDDFLAKPLDFALLDARIRSMHKA 127
           E AR+I+A   +  VPIIFL++L+  E LV  LEAGGDDF+AKP    +L A+IR+M + 
Sbjct: 67  EAARQIKALAGEALVPIIFLTSLNEEEGLVRCLEAGGDDFMAKPYSAVILAAKIRAMDRL 126

Query: 128 LDLQRQARESYRQL 141
             LQ    E   Q+
Sbjct: 127 RRLQATVLEQRDQI 140