Pairwise Alignments

Query, 443 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

Subject, 608 a.a., ATP-dependent RNA helicase RhlE from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  386 bits (991), Expect = e-111
 Identities = 220/474 (46%), Positives = 287/474 (60%), Gaps = 33/474 (6%)

Query: 1   MTFADLDLVPPLLEALDVLGYQTPTPVQEKAIPAVLAGGDLMAAAQTGTGKTASFALPLL 60
           MTF DL+L P +++A+   GY+TPTP+Q +AIPAVLAG DL+  AQTGTGKTA+F LP+L
Sbjct: 15  MTFDDLNLAPAIVQAVREHGYETPTPIQVEAIPAVLAGRDLLGGAQTGTGKTAAFTLPML 74

Query: 61  QRLAHDPEPTA---SNSTRALILVPTRELAQQVCDSFVAYGQFLVLRSYAVYGGVSINPQ 117
            RLA+     +       RAL+L PTRELA QV +S   YG+ L L S  V+GGV +NPQ
Sbjct: 75  HRLANSERAKSRFGGVGIRALVLTPTRELAAQVEESVRVYGKHLSLTSTVVFGGVGMNPQ 134

Query: 118 MMKLRKGVDILVATPGRLLDLHRQNAVRFDQVRTLVLDEADRMLDLGFARELNALFALLP 177
           +  +++GVDILVATPGRLLDL +Q  +    V+ LVLDEADRMLD+GF  ++  + AL+P
Sbjct: 135 INAMKRGVDILVATPGRLLDLQQQGFLDLSTVQMLVLDEADRMLDMGFIHDVKKILALVP 194

Query: 178 KQRQTLLFSATFSDAIRSMADQLLKKPLSIETARPNATARGIKQWVVPVDKKRKSALFCH 237
           K++Q+LLFSATFSD IR +A  LLK PL I+    N T + I Q + PV + +K AL  H
Sbjct: 195 KEKQSLLFSATFSDEIRDLASALLKDPLHIQVTPRNTTVQRITQVIHPVGRGKKKALLVH 254

Query: 238 LYKHKKWDQVLVFVKTRKGVDELVETLTAKGIAAESIHGDKPQPARLRALESFKAGQVRV 297
           +     W QVLVF +T+ G + + E LT  GI A ++HG+K Q AR +AL  FK+G++R 
Sbjct: 255 IINQHNWSQVLVFTRTKFGANNVAEYLTKNGIHAMALHGNKSQGARTQALAGFKSGEIRA 314

Query: 298 LVATDVASRGLDIDDLPRVVNFDLPIVPEDYVHRIGRTARAGASGEAVSLVCADEVNLLG 357
           LVATD+A+RG+DID+LP VVN+++P + EDYVHRIGRT RAG SGEAV+LV  DE   + 
Sbjct: 315 LVATDIAARGIDIDELPHVVNYEIPNISEDYVHRIGRTGRAGNSGEAVNLVSLDEEGFMM 374

Query: 358 AIEVLIGQ--PLSRIEQHGFEPDHRVPETGPAGQVI-----KKP---------------- 394
            IE    Q  P+    +   EP  +        Q I     K P                
Sbjct: 375 EIERFTKQQIPVQIFPEFMPEPGEKAEPIAMGRQTIWGGAGKPPSREVMAAAAKAARTEM 434

Query: 395 ------KKPKMPKHLDYGIGSGPSRGKGPGSAKAPGGRRGAGRPGGKAAPKARG 442
                 KK   P+    G G G  R +  G      G RG GR G     +A G
Sbjct: 435 LQRVREKKANEPQGRGNG-GGGGQRQRPAGDGSQADGPRGEGRRGNGGGQRANG 487