Pairwise Alignments

Query, 443 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

Subject, 453 a.a., ATP-dependent RNA helicase RhlE from Serratia liquefaciens MT49

 Score =  417 bits (1073), Expect = e-121
 Identities = 237/448 (52%), Positives = 288/448 (64%), Gaps = 16/448 (3%)

Query: 1   MTFADLDLVPPLLEALDVLGYQTPTPVQEKAIPAVLAGGDLMAAAQTGTGKTASFALPLL 60
           M+F  L L   +L A++  GY+ PTP+Q +AIP VL G DLMA+AQTGTGKTA F LPLL
Sbjct: 1   MSFETLGLSAEILRAVEEQGYREPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  QRLA-HDPEPTASNSTRALILVPTRELAQQVCDSFVAYGQFLVLRSYAVYGGVSINPQMM 119
           Q L+ HD         RALIL PTRELA Q+ ++  AY ++L LRS  V+GGVSINPQMM
Sbjct: 61  QLLSKHDHPVKGRRPVRALILTPTRELAAQIGENVEAYSKYLRLRSLVVFGGVSINPQMM 120

Query: 120 KLRKGVDILVATPGRLLDLHRQNAVRFDQVRTLVLDEADRMLDLGFARELNALFALLPKQ 179
           KLR GVDILVATPGRLLDL  Q AV   +V  LVLDEADRMLD+GF  ++  + A LP +
Sbjct: 121 KLRGGVDILVATPGRLLDLEHQRAVDLSKVEILVLDEADRMLDMGFIHDIRRVLAKLPAK 180

Query: 180 RQTLLFSATFSDAIRSMADQLLKKPLSIETARPNATARGIKQWVVPVDKKRKSALFCHLY 239
           RQ LLFSATFSD I+ +A++LL  P S+E AR N  +  I+Q V  VDKKRK  L   + 
Sbjct: 181 RQNLLFSATFSDDIKGLANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKRELLSQMI 240

Query: 240 KHKKWDQVLVFVKTRKGVDELVETLTAKGIAAESIHGDKPQPARLRALESFKAGQVRVLV 299
               W QVLVF +T+ G + L E L   GI A +IHG+K Q AR RAL  FK G++RVLV
Sbjct: 241 GEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVLV 300

Query: 300 ATDVASRGLDIDDLPRVVNFDLPIVPEDYVHRIGRTARAGASGEAVSLVCADEVNLLGAI 359
           ATD+A+RGLDID LP VVN++LP VPEDYVHRIGRT RA  +GEA+SLVC DE  LL  I
Sbjct: 301 ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCVDEHKLLRDI 360

Query: 360 EVLIGQPLSRIEQHGFEPDHRVPE----TGPAGQVIKKPKKPKMPKHLDYGIGSGPSRGK 415
           E L+ + + RI   G+EPD  +       G  G     P+          G G G   G 
Sbjct: 361 ERLLKREIPRIALPGYEPDPSIKAEPIINGRQGGGRGAPR----------GNGGGQRAGN 410

Query: 416 GPGSAKAPGGRRGAGRPGGKAAPKARGR 443
           G G     GG+R   R G  A P+  G+
Sbjct: 411 GGGQRSGNGGQR-ENRGGSSARPQGDGK 437