Pairwise Alignments

Query, 443 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

Subject, 454 a.a., RNA helicase (NCBI) from Escherichia coli BW25113

 Score =  425 bits (1093), Expect = e-123
 Identities = 236/453 (52%), Positives = 297/453 (65%), Gaps = 15/453 (3%)

Query: 1   MTFADLDLVPPLLEALDVLGYQTPTPVQEKAIPAVLAGGDLMAAAQTGTGKTASFALPLL 60
           M+F  L L P +L A+   GY+ PTP+Q++AIPAVL G DLMA+AQTGTGKTA F LPLL
Sbjct: 1   MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  QRL-AHDPEPTASNSTRALILVPTRELAQQVCDSFVAYGQFLVLRSYAVYGGVSINPQMM 119
           Q L    P        RALIL PTRELA Q+ ++   Y ++L +RS  V+GGVSINPQMM
Sbjct: 61  QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120

Query: 120 KLRKGVDILVATPGRLLDLHRQNAVRFDQVRTLVLDEADRMLDLGFARELNALFALLPKQ 179
           KLR GVD+LVATPGRLLDL  QNAV+ DQV  LVLDEADRMLD+GF  ++  +   LP +
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180

Query: 180 RQTLLFSATFSDAIRSMADQLLKKPLSIETARPNATARGIKQWVVPVDKKRKSALFCHLY 239
           RQ LLFSATFSD I+++A++LL  PL IE AR N  +  + Q V  VDKKRK  L  H+ 
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240

Query: 240 KHKKWDQVLVFVKTRKGVDELVETLTAKGIAAESIHGDKPQPARLRALESFKAGQVRVLV 299
               W QVLVF +T+ G + L E L   GI + +IHG+K Q AR RAL  FK+G +RVLV
Sbjct: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300

Query: 300 ATDVASRGLDIDDLPRVVNFDLPIVPEDYVHRIGRTARAGASGEAVSLVCADEVNLLGAI 359
           ATD+A+RGLDI++LP VVN++LP VPEDYVHRIGRT RA A+GEA+SLVC DE  LL  I
Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360

Query: 360 EVLIGQPLSRIEQHGFEPDHRVPETGPAGQVIKKPKKPKMPKHLDYGIGSG---PSRGKG 416
           E L+ + + RI   G+EPD  +       + I+  ++ +       G G G   P RG+G
Sbjct: 361 EKLLKKEIPRIAIPGYEPDPSI-----KAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEG 415

Query: 417 PGS------AKAPGGRRGAGRPGGKAAPKARGR 443
                    A+ P  R G  +P G+   + R R
Sbjct: 416 GAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPR 448