Pairwise Alignments

Query, 278 a.a., conserved hypothetical protein, proteobacterial from Dechlorosoma suillum PS

Subject, 276 a.a., Probable signal peptide protein from Variovorax sp. SCN45

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 89/297 (29%), Positives = 129/297 (43%), Gaps = 47/297 (15%)

Query: 5   KHLV--LLPLLLLAAGAARAEAEVAPDLTVSSNLNLASEYRFRGIDQTWGG--------- 53
           KHL+   LP+L+L   AA     +  +  +S N+   ++Y+FRG DQ   G         
Sbjct: 2   KHLIRIALPVLVLPTLAA---LPMLANAQLSGNVAFTTDYKFRGQDQDMLGKNDYAKTKA 58

Query: 54  --PALQGGVDLAHRN-GLYAGLWASNVSGNSYPGGNLEVDYYAGYN---GKLDDDWGYTV 107
             PA+QGG D A  + G Y G W S+V  N   G ++E D Y GY    G  D D    V
Sbjct: 59  FKPAIQGGFDYAFGDSGFYVGNWNSSV--NWLKGNSIESDIYGGYKFKAGVFDMD----V 112

Query: 108 GGYGYWYPGANVNKGTCPSAAWAAPCSLPGQKFDNFELNGGFSWRWLSYKLSVSLTDYFG 167
           G   Y YPG +    T           + G      E  G F+   L Y  +VS  DYFG
Sbjct: 113 GALTYIYPGNSSGNTT----------EVYGSAGYTDETIGSFT---LKYSHTVS-KDYFG 158

Query: 168 -ANTKTGYSGDTKGSLYHDLSANVPLAEDLTLNLHLGRTDVKATYGGIS-ADYTDYRLGL 225
            A  K G       + Y +L+ +  +   +TL   +G T++ +    +    Y DY +G 
Sbjct: 159 YAGNKAGSGLKGTNTGYLNLAYSKEVFPKVTLKAAVGYTNMSSDIRRLGYKSYVDYNVGA 218

Query: 226 TRTFSGGWSLSGAWVGATNDRFY----RPPVG-GLSAANGETRELNKDRLVLQVGRS 277
           +  F  G SL+G+  GA     Y     P V  G  A   +T   NK R ++ + ++
Sbjct: 219 SYDFGNGLSLAGSVQGANRQSSYLSVSNPGVDLGFGAFGKQTYSPNKARFIVTLTKT 275