Pairwise Alignments

Query, 501 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Dechlorosoma suillum PS

Subject, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

 Score =  288 bits (736), Expect = 4e-82
 Identities = 195/475 (41%), Positives = 253/475 (53%), Gaps = 23/475 (4%)

Query: 27  DSRRVQPGDVFVAYPGHAADGRSFIPAALEKGAAGVFWEARDFAWNPAWAAVPQLGVDNL 86
           DSR+  PG +FVA  G  ADG +++  A+ KGA  V       + +   A VP L V + 
Sbjct: 33  DSRKAAPGSLFVAVAGTKADGAAYVKDAVAKGAVAVV------SGHAVEADVPVLVVTDP 86

Query: 87  QSFAGHLANLVYGRPSEQLALVGVTGTNGKTTCSQWIAQALGGAGRSCAVIGTLGNGFPD 146
           + +    A+  YG+  +   +V VTGT GKT+ + ++ Q    AG + A IGT G   P 
Sbjct: 87  RLYLSLAASRFYGKQPD--TMVAVTGTAGKTSVASFVRQIWAFAGHAAAQIGTTGVIAPG 144

Query: 147 ALGEAANTTPDALALHRLLAEYKAAGAVACAMEVSSIGLDQGRCHGARFSVAVFTNLTRD 206
                A TTPD + LH LLAE  + G    AME SS GLDQ R  G   S A FTNL RD
Sbjct: 145 REDYGALTTPDPVTLHALLAELASEGVTHAAMEASSHGLDQRRLDGVHLSAAGFTNLGRD 204

Query: 207 HLDYHGTMAAYGAAKERLF--AWPELNEAVINLDDPFGRELLAQTTASLRIGYTLEGRQA 264
           H+DYH T+  Y AAK RLF     +   AVI  DDP+  + +    A+   G  LE R  
Sbjct: 205 HMDYHPTIEDYMAAKMRLFDTLMEKGAPAVIFADDPWSDKAIG---AAREAG--LEVRTV 259

Query: 265 TEADWLLSAENLRHGAEGLAFTLIAPQGRVVVETGLVGRYNVANLLAVAGALLALGLPLE 324
                 L+ + + H        +        V+  L G + VAN L  AG  ++ G+P  
Sbjct: 260 GRNGQYLTLKRVEHFRHKQMIEVHHDGVIFEVDIPLAGDFQVANALVAAGLAMSTGVPAA 319

Query: 325 TVGQRLCRLTPPAGRMQRFG-GKGLPLVVVDYAHSPDALENALTALREVTQARGGRLHCV 383
           T  + L +L   AGR++  G  K   L  VDYAH PDALEN LT++R  T    GR+  V
Sbjct: 320 TALKALEKLVGAAGRLELVGQTKNGALAYVDYAHKPDALENVLTSVRPFT---SGRIITV 376

Query: 384 FGCGGDRDKGKRPLMGSVAARLADEVLLTSDNPRSEDPLAILAEIRAGAPEAALEAEREV 443
           FGCGGDRDKGKRP+MG VA RL+D V++T DNPRSED   I +E+ A A  A    +R  
Sbjct: 377 FGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSEVMAAAAGALEIGDRAE 436

Query: 444 AVAHAVLRADVADVVLVAGKGHEPYQEIMGAAGLVRRPYSDIEAVARALQQRAGS 498
           A+ HAV      D ++VAGKGHE  Q +    G V  P+SD E V  AL +  GS
Sbjct: 437 AIRHAVSMLSHGDTLIVAGKGHEEGQIV----GSVTLPFSDHEQVRSALAELEGS 487