Pairwise Alignments

Query, 263 a.a., Transcriptional regulatory protein (probably AraC-family) from Mycobacterium tuberculosis H37Rv

Subject, 288 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  115 bits (288), Expect = 1e-30
 Identities = 74/221 (33%), Positives = 109/221 (49%), Gaps = 3/221 (1%)

Query: 25  HRHPSHQIVYPSAGAVSVTTHAGTWITPVNRAIWIPAGCWHQHKFHGHTQFHGVALDPQR 84
           H H   Q++Y   G +     AG WI P   A+WIP G  H  +  G  + + + +DP  
Sbjct: 41  HSHRKGQLMYTLRGVIHCQIEAGIWIVPPQCALWIPGGLPHAARGSGEAEVYCLLIDPDA 100

Query: 85  YRGGPATPTVLAVNPLMRELVI-ACSQADRTDTD-EHHRMLAVLQDQLPTTSIREPLWVP 142
               PA    L+V+ L+ EL+  A S     D D    R++  L D+L    I E L +P
Sbjct: 101 AGALPAQCCTLSVSGLLHELISKAVSFPQLYDEDGAQGRLIRTLLDELAQAPI-EDLHLP 159

Query: 143 SPTDRRLRHACALIADNLTQPLTLQQIGGRIGVSQRTLSRLFSDELGMTFPQWRTQLRLQ 202
            P D RLR     +  +     TL Q   RIG+S+R+++RL  +E G++F +WR QL + 
Sbjct: 160 MPRDPRLRRLADSLLADPGDKATLGQWAMRIGMSERSMTRLLLEEFGLSFGRWRRQLHVI 219

Query: 203 HALVLLAERHDVTSVASECGWATPSAFIDTYRQAFGHTPGQ 243
            +L  LA    V  VA + G+   S FI  +R+A G  P +
Sbjct: 220 LSLQRLARGDSVQRVALDLGYENASGFITMFRKAVGQPPAR 260