Pairwise Alignments

Query, 1089 a.a., Conserved integral membrane transport protein MmpL8 from Mycobacterium tuberculosis H37Rv

Subject, 791 a.a., RND transporter from Pseudomonas simiae WCS417

 Score = 62.0 bits (149), Expect = 2e-13
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 16/158 (10%)

Query: 219 EFAITILLLVILLII---------YGNPITMVLPLITIGMSVVVAQRLVAIAGLAGLGIA 269
           E  +TIL+LV L +          +   + +VLPL+   ++ V+   L+A  G+ G+ +A
Sbjct: 620 ESELTILILVYLCVATMCMITFRSWAATLCIVLPLV---LTSVLGNALMAFMGI-GVKVA 675

Query: 270 NQSIIFMSGMMVGAGTDYAVFLISRYHDYLRQGADSDQAVKKALTSIGKVIAASAATVAI 329
              ++ +    VG G DY +++ SR   +LR G    +A  + L S GK +  +   +AI
Sbjct: 676 TLPVVALG---VGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTLKSTGKAVLFTGLCLAI 732

Query: 330 TFLGMVFTQLGILKTVGPMLGISVAVVFFAAVTLLPAL 367
                +F+ +     +G ML   +    F A+ LLPAL
Sbjct: 733 GVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPAL 770



 Score = 41.6 bits (96), Expect = 2e-07
 Identities = 35/177 (19%), Positives = 81/177 (45%), Gaps = 13/177 (7%)

Query: 220 FAITILLLVILLIIYGNPITMVLPLITIGMSVVVAQRLVAIAGLAGLGIANQSIIFMSGM 279
           F +   + ++LL+ + N +   + +++  +  VV Q  + +   AG G+   S++ +  +
Sbjct: 243 FGVAFGITLVLLLWFTNCLRSTIAVLSTTLVAVVWQ--LGLMHAAGFGLDPYSML-VPFL 299

Query: 280 MVGAGTDYAVFLISRYHDYLRQGADSDQAVKKALTSIGKVIAASAATV---AITFLGMVF 336
           +   G  + V    + +    Q +++D A+  A  +  ++       +   A+ F+ ++ 
Sbjct: 300 IFAIGISHGV---QKINGIALQSSEADNALTAARRTFRQLFLPGMIAILADAVGFITLLI 356

Query: 337 TQLGILKTVGPMLGISVAVVFFAAVTLLPALMVLTG--RRGWIAPRRDLTRR--FWR 389
             +G+++ +     I VAV+ F  + LLP  +   G  +R     ++D  R   FWR
Sbjct: 357 IDIGVIRELAIGASIGVAVIVFTNLILLPVAISYVGISKRAIAKSKKDANREHPFWR 413