Pairwise Alignments

Query, 183 a.a., Conserved protein from Mycobacterium tuberculosis H37Rv

Subject, 215 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 48.9 bits (115), Expect = 6e-11
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 5/144 (3%)

Query: 11  GRDFRDEDLSRLHTERAMFSECDFSGVNLAESQHRGSAFRNCTFERTTLWHSTFAQCSML 70
           G D R++DLS+++   A   E D    NL  +    +  +     R +L  +     +  
Sbjct: 45  GADLRNQDLSKMNLAGADLREADLRHANLDLANLEKAQLQGANLTRASLQQANLRLANFS 104

Query: 71  GSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLR-----KCVLR 125
           G+  +A +   L      F  A L    L+   L+G ++ + +L   DL      K  L+
Sbjct: 105 GATLMAIQGWGLFAQGAQFENANLSAAYLQFARLSGAKMHKANLRAADLEMTWLSKADLQ 164

Query: 126 GADLSGARTTGARLDDADLRGATV 149
           GADLS A    A+  +++L  AT+
Sbjct: 165 GADLSDANLQEAKFGESNLEQATL 188



 Score = 39.7 bits (91), Expect = 4e-08
 Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 10/137 (7%)

Query: 18  DLSRLHTERAMFSECDFSGVNLAESQHRGSAFRNCTFERTTLWHSTFAQCSMLGSVFVAC 77
           +L+R   ++A     +FSG  L   Q  G   +   FE   L  +      + G+     
Sbjct: 87  NLTRASLQQANLRLANFSGATLMAIQGWGLFAQGAQFENANLSAAYLQFARLSGAKMHKA 146

Query: 78  RLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGA 137
            LR   L+    + A L G DL   NL   +  E++          L  A L+G+R   A
Sbjct: 147 NLRAADLEMTWLSKADLQGADLSDANLQEAKFGESN----------LEQATLTGSRQHYA 196

Query: 138 RLDDADLRGATVDPVLW 154
              DA++ G    P  W
Sbjct: 197 NFQDANMEGCQDCPTTW 213



 Score = 35.8 bits (81), Expect = 5e-07
 Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 91  LAVLGGNDLRGLNLTGCRLRETSLVD-TDLRKCVLRGADLSGARTTGARLDDADLRGATV 149
           LA     D   L + GC L E S     +L+   LR  DLS     GA L +ADLR A +
Sbjct: 14  LAHADDGDDAPLIINGCTLAERSQCPGANLKGADLRNQDLSKMNLAGADLREADLRHANL 73

Query: 150 DPVLWRTASLVGARV 164
           D      A L GA +
Sbjct: 74  DLANLEKAQLQGANL 88



 Score = 34.7 bits (78), Expect = 1e-06
 Identities = 23/67 (34%), Positives = 35/67 (52%)

Query: 96  GNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDADLRGATVDPVLWR 155
           G +L+G +L    L + +L   DLR+  LR A+L  A    A+L  A+L  A++     R
Sbjct: 40  GANLKGADLRNQDLSKMNLAGADLREADLRHANLDLANLEKAQLQGANLTRASLQQANLR 99

Query: 156 TASLVGA 162
            A+  GA
Sbjct: 100 LANFSGA 106



 Score = 34.3 bits (77), Expect = 2e-06
 Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 5/59 (8%)

Query: 92  AVLGGNDLRG-----LNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDADLR 145
           A L G DLR      +NL G  LRE  L   +L    L  A L GA  T A L  A+LR
Sbjct: 41  ANLKGADLRNQDLSKMNLAGADLREADLRHANLDLANLEKAQLQGANLTRASLQQANLR 99



 Score = 29.6 bits (65), Expect = 4e-05
 Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%)

Query: 85  DDVDFTLAVLGGNDLRGLN-LTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDAD 143
           DD D    ++ G  L   +   G  L+   L + DL K  L GADL  A    A LD A+
Sbjct: 18  DDGDDAPLIINGCTLAERSQCPGANLKGADLRNQDLSKMNLAGADLREADLRHANLDLAN 77

Query: 144 LRGATVDPVLWRTASLVGARV 164
           L  A +       ASL  A +
Sbjct: 78  LEKAQLQGANLTRASLQQANL 98



 Score = 22.3 bits (46), Expect = 0.006
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 13  DFRDEDLSRLHTERAMFSECDFSGVNLAESQHRGSAFRNCTFE 55
           D +  DLS  + + A F E +     L  S+   + F++   E
Sbjct: 162 DLQGADLSDANLQEAKFGESNLEQATLTGSRQHYANFQDANME 204