Pairwise Alignments

Query, 790 a.a., RecA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RecA intein)]. from Mycobacterium tuberculosis H37Rv

Subject, 348 a.a., DNA recombination/repair protein RecA from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  352 bits (903), Expect = e-101
 Identities = 174/252 (69%), Positives = 214/252 (84%), Gaps = 1/252 (0%)

Query: 1   MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60
           M+ + ++ KAL+L + +++K+YGKG+VM+L D   + I  I TGS+ LD+ALGIGGLPRG
Sbjct: 1   MSVSNEKLKALQLTMDKLDKTYGKGTVMKLSDNKVEDIPAISTGSLGLDIALGIGGLPRG 60

Query: 61  RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120
           RV+EIYGPESSGKTT+ +H +A AQ  GG+AAFIDAEHA D  YA+KLG+DT++LL+SQP
Sbjct: 61  RVVEIYGPESSGKTTLTMHCIAEAQRKGGLAAFIDAEHAFDRVYAQKLGIDTENLLISQP 120

Query: 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180
           D GEQALEIAD LIRSGA+DI+VIDSVAALVP+ ELEG+MGDS +GLQARLMSQALRK+T
Sbjct: 121 DNGEQALEIADHLIRSGAIDIIVIDSVAALVPKGELEGDMGDSKMGLQARLMSQALRKLT 180

Query: 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGT-NAV 239
           G +N +G T IFINQLR+KIGVMFG+PETTTGG ALKFYASVR+D+RR+  +K+   N  
Sbjct: 181 GTINKTGCTCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRIGQIKESADNIT 240

Query: 240 GNRTRVKVVKNK 251
           GNRTRVKVVKNK
Sbjct: 241 GNRTRVKVVKNK 252



 Score = 95.9 bits (237), Expect = 3e-24
 Identities = 41/92 (44%), Positives = 68/92 (73%), Gaps = 6/92 (6%)

Query: 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746
           VV +  +PPFK  EFDI+YG+GIS+ G ++D+GV+ G+++KSG+WF+Y G++LGQG++  
Sbjct: 248 VVKNKVAPPFKVVEFDIMYGEGISKVGEVLDLGVELGIVQKSGSWFSYNGDKLGQGRDGV 307

Query: 747 RNFLVENADVADEIEKKIKEKLGIGAVVTDDP 778
           +  L++N ++ +EIE KI+      A+V  +P
Sbjct: 308 KQILLDNPELMEEIEGKIR------AIVKGEP 333