Pairwise Alignments

Query, 790 a.a., RecA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RecA intein)]. from Mycobacterium tuberculosis H37Rv

Subject, 353 a.a., recombinase RecA from Serratia liquefaciens MT49

 Score =  340 bits (873), Expect = 6e-98
 Identities = 165/249 (66%), Positives = 203/249 (81%)

Query: 6   DREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIEI 65
           +++KAL  A+ QIEK +GKGS+MRLG++    +  I TGS++LD+ALG GGLP GR++EI
Sbjct: 6   NKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEI 65

Query: 66  YGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQ 125
           YGPESSGKTT+ L  +A AQ  G   AFIDAEHALDP YAKKLGVD D+LL SQPDTGEQ
Sbjct: 66  YGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQ 125

Query: 126 ALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNN 185
           ALEI D L RSGA+D++++DSVAAL P+AE+EGE+GDSH+GL AR+MSQA+RK+ G L N
Sbjct: 126 ALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKN 185

Query: 186 SGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRV 245
           + T  IFINQ+R KIGVMFG+PETTTGG ALKFYASVR+D+RR+  +K+G   VG+ TRV
Sbjct: 186 ANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDEVVGSETRV 245

Query: 246 KVVKNKCLA 254
           KVVKNK  A
Sbjct: 246 KVVKNKIAA 254



 Score = 97.8 bits (242), Expect = 9e-25
 Identities = 44/82 (53%), Positives = 62/82 (75%)

Query: 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746
           VV +  + PFKQAEF ILYG+GI+  G L+D+GV   +I K+GAW++Y G+++GQGK NA
Sbjct: 247 VVKNKIAAPFKQAEFQILYGEGINSRGELVDLGVKHKMIEKAGAWYSYNGDKIGQGKANA 306

Query: 747 RNFLVENADVADEIEKKIKEKL 768
            NFL EN  VA E++KK+++ L
Sbjct: 307 CNFLKENPAVAAELDKKLRDLL 328