Pairwise Alignments

Query, 790 a.a., RecA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RecA intein)]. from Mycobacterium tuberculosis H37Rv

Subject, 363 a.a., RecA protein from Agrobacterium fabrum C58

 Score =  345 bits (885), Expect = 2e-99
 Identities = 172/247 (69%), Positives = 209/247 (84%), Gaps = 1/247 (0%)

Query: 6   DREKALELAVAQIEKSYGKGSVMRLG-DEARQPISVIPTGSIALDVALGIGGLPRGRVIE 64
           D+ KALE A++QIE+S+GKGS+M+LG +E    +  + TGS++LD+ALGIGGLP+GR+IE
Sbjct: 15  DKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIE 74

Query: 65  IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 124
           IYGPESSGKTT+AL  +A AQ  GG+ AF+DAEHALDP YA+KLGVD  SLL+SQPDTGE
Sbjct: 75  IYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGE 134

Query: 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 184
           QALEI D L+RSGA+D++VIDSVAAL PRAE+EGEMGDS  GLQARLMSQALRK+T +++
Sbjct: 135 QALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASIS 194

Query: 185 NSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTR 244
            S    IFINQ+R KIGVMFGSPETTTGG ALKFYASVR+D+RR+  +K+    VGN+TR
Sbjct: 195 KSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQTR 254

Query: 245 VKVVKNK 251
           VKVVKNK
Sbjct: 255 VKVVKNK 261



 Score =  106 bits (264), Expect = 2e-27
 Identities = 44/84 (52%), Positives = 65/84 (77%)

Query: 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746
           VV +  +PPFKQ EFDI+YG+G+S+ G L+D+GV  G++ KSGAWF+Y  ++LGQG+ENA
Sbjct: 257 VVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGRENA 316

Query: 747 RNFLVENADVADEIEKKIKEKLGI 770
           + FL +N D A+EIE  +++  G+
Sbjct: 317 KTFLRDNPDTANEIELALRQNAGL 340