Pairwise Alignments

Query, 268 a.a., Possible DNA glycosylase from Mycobacterium tuberculosis H37Rv

Subject, 279 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Magnetospirillum magneticum AMB-1

 Score = 75.1 bits (183), Expect = 2e-18
 Identities = 83/282 (29%), Positives = 115/282 (40%), Gaps = 30/282 (10%)

Query: 1   VPEGHTLHR-LARLHQ-RRFAGAPVSVSSPQGRFA-DSASALNGRVLRRASAWGKHLFHH 57
           +PE  T+ R LA++   RRF       +  +  F  D A  L GR +       K+L   
Sbjct: 4   LPEVETVARGLAQVWDGRRFVSVETRRAGLRVPFPKDFARRLTGRTVEAVGRRAKYLVVR 63

Query: 58  YVGGPVVHVHLGLYGTFTEWARPTDGWLPEPAGQVRMRMVGAEFGTDLRGP------TVC 111
             GG V+  HLG+ G  T  A   +   P P   V   +        L  P       +C
Sbjct: 64  LDGGLVMLGHLGMSGRMTIGALRNEP--PGPHDHVEW-VTDQGISVTLTDPRRFGLFALC 120

Query: 112 ESIDDGEVADVVARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVIAGVGNVYRNE 171
           E+ D G    ++A +GP+PL    +       +     PI  +L+DQ V+AG+GN+Y  E
Sbjct: 121 EASDLGG-HPLLAGIGPEPLDEAFDAGVLAKALAGKTGPIKTVLLDQKVVAGLGNIYVCE 179

Query: 172 LLFRHRIDPQRPGRGIGEPEFDAAWNDLVSLMKVGLRRGKIIVVRPEHDHGLP----SYL 227
            LFR  I P RP   +   E       LV L+K  L            DH  P     Y 
Sbjct: 180 SLFRAEISPLRPAGSLSRAEV----GRLVPLIKAVLSEAVAAGGSTLRDHARPDGELGYF 235

Query: 228 PDRPRTYVYRRAGEPC------RVCGGVIRTALLEGRNVFWC 263
             +    VY R GE C        CGG++R     GR+ F+C
Sbjct: 236 --QHSFQVYGREGETCPGCPGAPACGGILRMT-QAGRSTFYC 274