Pairwise Alignments

Query, 413 a.a., PE-PGRS family protein PE_PGRS39 from Mycobacterium tuberculosis H37Rv

Subject, 439 a.a., PE-PGRS family protein PE_PGRS59 from Mycobacterium tuberculosis H37Rv

 Score =  206 bits (524), Expect = 1e-57
 Identities = 174/451 (38%), Positives = 197/451 (43%), Gaps = 106/451 (23%)

Query: 1   MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ 60
           MS V A P  L+A+A +LA +GST+ AANAAA+ PT GVLAAG DDVSA IAALFGA AQ
Sbjct: 1   MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60

Query: 61  AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANA---------LPLQKAQGVVSELAQD 111
           AYQ ISAQAA FH +FVQ L  GA AYA AEAAN           P Q   G    L  D
Sbjct: 61  AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLG--RPLIGD 118

Query: 112 RTGGTGTGQSRGAGGF----GG-------VGQAGGKGWDGGPIGNGQVGEQHGAGQLGST 160
              GT  GQ+ GAGG     GG        G AGG G   G IGNG  G   GAG  G +
Sbjct: 119 GADGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGS 178

Query: 161 DGN-------------------PGVAGAAHGSGVSA----SHGSGATGAAGVADPGGSG- 196
            G                    PG  G A G+G +A    + G+G  GAAG A   G   
Sbjct: 179 GGQGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNP 238

Query: 197 ----AGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMA------SGDGGLSTG 246
               AG GS   NG   G     G  GT     G   G GG G++      +G  G + G
Sbjct: 239 LTVPAGQGSMGNNGEPGGP----GQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGG 294

Query: 247 AAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSPATTSAV 306
           A G+   GGL+ G GGA   GG  G GGEG  GA GG G Q     A  P V        
Sbjct: 295 AGGSGGRGGLLVGDGGA---GGIGGTGGEGGIGARGGTGGQGGMGGAGQPGVG------- 344

Query: 307 AAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLTSLRGLR 366
                                G+A   GN    G+     DGG              G  
Sbjct: 345 ---------------------GDAGDGGNGGIGGDGGAGGDGG-------------AGGA 370

Query: 367 HTLKKLSGLRARNGL--LTASGDNASGSGRP 395
                L G+   +GL     SG N  G G P
Sbjct: 371 GGAGGLFGVSGSSGLGGAAGSGGNGGGGGEP 401



 Score =  102 bits (255), Expect = 2e-26
 Identities = 81/214 (37%), Positives = 92/214 (42%), Gaps = 36/214 (16%)

Query: 114 GGTGTGQSRGAGGFGGVGQAGGKGWDGG-----PIGNGQVG---EQHGAGQLGSTDGNPG 165
           G  G     G GG GG+G AG  G  G      P G G +G   E  G GQ G+  G  G
Sbjct: 209 GAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLTVPAGQGSMGNNGEPGGPGQPGTEFGQTG 268

Query: 166 VAGAAHGSGVSASHGSGATGAAGVADPGGSGA------------GVGSAAGNGTGAGSAD 213
             G   G+G+S     G  G  G    GGSG             G+G   G G G G+  
Sbjct: 269 GTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGGRGGLLVGDGGAGGIGGTGGEG-GIGARG 327

Query: 214 AVGG----AGTGRDIVGSVRGDGGVGMASGDGGLST--GAAGASAEGGLMPGFGGAPWVG 267
             GG     G G+  VG   GDGG G   GDGG     GA GA   GGL  G  G+  +G
Sbjct: 328 GTGGQGGMGGAGQPGVGGDAGDGGNGGIGGDGGAGGDGGAGGAGGAGGLF-GVSGSSGLG 386

Query: 268 GHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSPA 301
           G  G GG G     GG GE   P VA +P V PA
Sbjct: 387 GAAGSGGNG-----GGGGE---PGVAGSPGVGPA 412



 Score =  101 bits (251), Expect = 5e-26
 Identities = 100/309 (32%), Positives = 126/309 (40%), Gaps = 48/309 (15%)

Query: 12  AASAGELAAIGSTMRAANAAAAAPTAG----VLAAGGDDVSAGIAALFGARAQAYQAISA 67
           +  A  L   G +  A  A AA  + G    +   GG   + G A + G    A  A   
Sbjct: 154 SGGAAGLIGNGGSGGAGGAGAAGGSGGQGGLLYGNGGAGGNGGAATIPGGNGGAGGA-GG 212

Query: 68  QAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQD-----------RTGGT 116
            A LF +     L  GAA  A A   N L +   QG +    +            +TGGT
Sbjct: 213 NAWLFGNGGAGGL--GAAGAAGAAGVNPLTVPAGQGSMGNNGEPGGPGQPGTEFGQTGGT 270

Query: 117 G--------TGQSRGAGGFGGVGQAGGKGWDGGP-IGNGQVGEQHGAGQLGSTDGNPGVA 167
           G         G + G GG GG G AGG G  GG  +G+G      GAG +G T G  G+ 
Sbjct: 271 GGTGGTGLSVGGTGGTGGTGGTGGAGGSGGRGGLLVGDG------GAGGIGGTGGEGGIG 324

Query: 168 GAAHGSGVSASHGSGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGS 227
                 G     G+G  G  G A  GG+G G+G   G G G G A   GGAG     +  
Sbjct: 325 ARGGTGGQGGMGGAGQPGVGGDAGDGGNG-GIGGDGGAG-GDGGAGGAGGAGG----LFG 378

Query: 228 VRGDGGVGMASGDGGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQ 287
           V G  G+G A+G GG        +  GG  PG  G+P VG   G GG+G+ G  G  G  
Sbjct: 379 VSGSSGLGGAAGSGG--------NGGGGGEPGVAGSPGVGPA-GRGGDGNLGQFGPEGAP 429

Query: 288 VAPAVATAP 296
             P     P
Sbjct: 430 GQPGQPGQP 438