Pairwise Alignments
Query, 413 a.a., PE-PGRS family protein PE_PGRS39 from Mycobacterium tuberculosis H37Rv
Subject, 714 a.a., PE-PGRS family protein PE_PGRS55 from Mycobacterium tuberculosis H37Rv
Score = 184 bits (467), Expect = 7e-51
Identities = 133/330 (40%), Positives = 161/330 (48%), Gaps = 46/330 (13%)
Query: 1 MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ 60
+S V +P V++A+AG+LA +GST+ AAN AAAA T VLAAG D+VSA IAALFG
Sbjct: 1 VSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query: 61 AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANA---------LPLQKAQG--VVSELA 109
YQAISAQ A +H +FVQ L+ GAA+Y +AEA N P Q G ++ + A
Sbjct: 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120
Query: 110 QDRTGGTGTGQ------SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGN 163
T G G S G G G GQAGG G G +GNG G G G G GN
Sbjct: 121 NATTPGGAGGDGGLLFGSGGNGAPGAPGQAGGAGGSAGLLGNGGSGGAGGTGAPGGNGGN 180
Query: 164 P----------GVAGAAHGSGVSASH----GSGATGAAGVADPGGSG------AGVGSAA 203
G G G+G + H G G TG G PGG+G G G A
Sbjct: 181 AGWLYGRGGVGGAGGIGGGTGGAGGHAWLFGHGGTGGIG-GGPGGNGGWLLGNGGHGGAG 239
Query: 204 GNGTGAGSADAVGGAGTGRDIVGSVRG-DGGVGMASGDGGLSTGAAGASAEGGLMPGFGG 262
G G G+G A GG G +G G GG G G+ G G GG+ G GG
Sbjct: 240 GIGGGSGGAGGNGGWLLGNGGIGGAGGTGGGAGGTGGNAAWLLGGGGTGGAGGIGGGNGG 299
Query: 263 ----APWV---GGHWGLGGEGHSGAIGGVG 285
W+ GG+ GLGG+G G GG G
Sbjct: 300 HGGNGGWLLGNGGNGGLGGDGDGGTGGGHG 329
Score = 119 bits (297), Expect = 4e-31
Identities = 89/246 (36%), Positives = 104/246 (42%), Gaps = 26/246 (10%)
Query: 114 GGTGTGQSRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGS 173
GG G G G GG G +GG G DGG GNG G GAGQL S + GVAGA+
Sbjct: 436 GGGGDGFDGTMAGLGGTGGSGGTGGDGGAPGNGGAG---GAGQLLS---HSGVAGASGKG 489
Query: 174 GVSASHGSGATGAAGVADPGGSGA--------GVGSAAGNGTGAGSADAVGGAGTGRDIV 225
G + G+G G+AG P GSGA G G GNG G+G++ GG G G
Sbjct: 490 GAGGTGGNGGAGSAGADAPAGSGAMGSTGFAGGAGGDGGNGGGSGASQGNGGNG-GNGGT 548
Query: 226 GSVRGDGGVGMASGDGGLSTGAAGASAEGGL--MPGFGGAPWVGGHWGLGGEGHSGAIGG 283
G G GG GM S D L+ G GG G GG + G G G G G +GG
Sbjct: 549 GGKGGTGGAGMNSLDPLLAAQDGGQGGTGGTGGNAGAGGTGFTQGADGNAGNGGDGGVGG 608
Query: 284 VGEQVAPAVATAPAVSPATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSA 343
G A TT+A G+ A A G QGN + GN
Sbjct: 609 NGGNGA---------DNTTTAAAGTTGGAGGAGGAGGTGGAAGTGTGGQQGNGGNGGNGG 659
Query: 344 RRADGG 349
GG
Sbjct: 660 TGGKGG 665
Score = 103 bits (257), Expect = 2e-26
Identities = 97/279 (34%), Positives = 112/279 (40%), Gaps = 51/279 (18%)
Query: 114 GGTGTGQSRGAGGFGGVGQAGGKGW---DGGPIGNGQVGEQHGAGQLGSTDGNPG-VAGA 169
GG GTG + G GG G G G GW +GG G G G+ G G GNPG + G
Sbjct: 283 GGGGTGGAGGIGGGNG-GHGGNGGWLLGNGGNGGLGGDGDGGTGGGHGGNGGNPGWLLGT 341
Query: 170 AHGSG-------VSASHGSGATG-------------AAGVADPGGSGAGVGSAAGNGTGA 209
A G G +A GSG TG AG GG+G G G A NG GA
Sbjct: 342 AGGGGNGGAGSTGTAGGGSGGTGGDGGTGGRGGLLMGAGAGGHGGTG-GAGGAGVNGGGA 400
Query: 210 GSADAVGGAG---------TGRDIVGSVRGDGGVGMASGDG------GL-STGAAGASAE 253
G A GG G GR G G GG G GDG GL TG +G +
Sbjct: 401 GGAGGAGGNGGAGGQAALLFGRGGTGGAGGYGGDGGGGGDGFDGTMAGLGGTGGSGGTGG 460
Query: 254 GGLMPGFGGAPWVG---GHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSPATTSAVAAES 310
G PG GGA G H G+ G G GG G +A A +PA + A+
Sbjct: 461 DGGAPGNGGAGGAGQLLSHSGVAGASGKGGAGGTGGN--GGAGSAGADAPAGSGAM---- 514
Query: 311 GSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGG 349
GST G+ A QGN + GN GG
Sbjct: 515 GSTGFAGGAGGDGGNGGGSGASQGNGGNGGNGGTGGKGG 553
Score = 94.4 bits (233), Expect = 1e-23
Identities = 79/222 (35%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 83 GAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQSRGAGGFGGVGQAGGKGW---- 138
G A A A+A + G D G G+G S+G GG GG G GGKG
Sbjct: 498 GGAGSAGADAPAGSGAMGSTGFAGGAGGDGGNGGGSGASQGNGGNGGNGGTGGKGGTGGA 557
Query: 139 ------------DGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHGSGA--T 184
DGG G G G GAG G T G G AG GV + G+GA T
Sbjct: 558 GMNSLDPLLAAQDGGQGGTGGTGGNAGAGGTGFTQGADGNAGNGGDGGVGGNGGNGADNT 617
Query: 185 GAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGDGGL- 243
A GG+G G G A G G G AGTG G +G+GG G G GG
Sbjct: 618 TTAAAGTTGGAG-GAGGAGGTG---------GAAGTG---TGGQQGNGGNGGNGGTGGKG 664
Query: 244 STGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVG 285
TG AG ++ L+ A GG G GG G + GG G
Sbjct: 665 GTGGAGMNSLDPLL-----AAQDGGQGGTGGTGGNAGAGGTG 701
Score = 88.6 bits (218), Expect = 6e-22
Identities = 70/194 (36%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 115 GTGTGQSRGAGGF----GGVGQAGGKGWDGGPIGNGQV-----GEQHGAGQLGSTDGNPG 165
G G+G + G GG+ GG+G AGG G G G G GAG +G +G G
Sbjct: 242 GGGSGGAGGNGGWLLGNGGIGGAGGTGGGAGGTGGNAAWLLGGGGTGGAGGIGGGNGGHG 301
Query: 166 VAGA----AHGSGVSASHGSGATGAAGVADPGGSGAGVGSAAGNGTG-AGSADAVGGAGT 220
G G+G G G TG + G G +G+A G G G AGS GG
Sbjct: 302 GNGGWLLGNGGNGGLGGDGDGGTGGGHGGNGGNPGWLLGTAGGGGNGGAGSTGTAGGGSG 361
Query: 221 GRDIVGSVRGDGGVGMASGDGGL--STGAAGASAEGGLMPGFGGAPWVGGH-------WG 271
G G G GG+ M +G GG + GA GA GG G GGA GG +G
Sbjct: 362 GTGGDGGTGGRGGLLMGAGAGGHGGTGGAGGAGVNGGGAGGAGGAGGNGGAGGQAALLFG 421
Query: 272 LGGEGHSGAIGGVG 285
GG G +G GG G
Sbjct: 422 RGGTGGAGGYGGDG 435
Score = 40.8 bits (94), Expect = 1e-07
Identities = 26/62 (41%), Positives = 27/62 (43%), Gaps = 16/62 (25%)
Query: 115 GTGTGQSRGAGGFGGVGQAGGKGW----------------DGGPIGNGQVGEQHGAGQLG 158
GTGTG +G GG GG G GGKG DGG G G G GAG G
Sbjct: 642 GTGTGGQQGNGGNGGNGGTGGKGGTGGAGMNSLDPLLAAQDGGQGGTGGTGGNAGAGGTG 701
Query: 159 ST 160
T
Sbjct: 702 FT 703