Pairwise Alignments

Query, 413 a.a., PE-PGRS family protein PE_PGRS39 from Mycobacterium tuberculosis H37Rv

Subject, 515 a.a., PE-PGRS family protein PE_PGRS34 from Mycobacterium tuberculosis H37Rv

 Score =  198 bits (504), Expect = 3e-55
 Identities = 135/300 (45%), Positives = 157/300 (52%), Gaps = 25/300 (8%)

Query: 1   MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ 60
           MS V AAP V+ A+A +LA IGS + AANAAAA PT GVLAAG D+VSA +A LFGA AQ
Sbjct: 1   MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ 60

Query: 61  AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSEL------------ 108
           AYQA+SAQAALFH++FV  +  GA AYA AEAA+A  L    G    L            
Sbjct: 61  AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG 120

Query: 109 AQDRTGGTG--TGQSRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGV 166
           A  + GG G     + G GG GG+GQ GG G D G IGNG  G   G G  G   G  GV
Sbjct: 121 APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGATGLAGGAGGV 180

Query: 167 AGAAHGSGVSASHGSGATG----AAGVADPGGSGAGV---GSAAGNGTGAGSADAVGGAG 219
            G   G G +   G   TG      G+  PGG+  G+   G A G G G G A   GGAG
Sbjct: 181 GGLLFGDGGNGGAGGLGTGPVGATGGIGGPGGAAVGLFGHGGAGGAG-GLGKAGFAGGAG 239

Query: 220 TGRDIVGSVRGDGGVGMASGDGGLSTGAAGAS---AEGGLMPGFGGAPWVGGHWGLGGEG 276
                 G + G+GG G     G    GA G +     GG     G AP   G+ G GG G
Sbjct: 240 GTGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGNGGDGGSVGAAPTGIGNGGNGGNG 299



 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 68/203 (33%), Positives = 75/203 (36%), Gaps = 33/203 (16%)

Query: 114 GGTGTGQSRGAG--GFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAH 171
           G  G G S GA   G G  G  G  GW  G  G+G  G        G T GN G+ G   
Sbjct: 275 GNGGDGGSVGAAPTGIGNGGNGGNGGWLYGDGGSG--GSTLQGFSDGGTGGNAGMFGDGG 332

Query: 172 GSGVSASHGSGATGAAG--VADPGGSGA----------GVGSAAGNGTGA---GSADAVG 216
             G S   G+G  G  G  +   GG G           G G   GN  G    G A   G
Sbjct: 333 NGGFSFFDGNGGDGGTGGTLIGNGGDGGNSVQTDGFLRGHGGDGGNAVGLIGNGGAGGAG 392

Query: 217 GAGTGRDIVGSVRGDGGVGMASGDGGLSTGAAGASAEGG---------LMPGFGGAPWVG 267
            AGTG    G     GG G   G+G L  G  GA   GG          + G GG    G
Sbjct: 393 SAGTGVFAPG-----GGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVPVTGAGGTGGNG 447

Query: 268 GHWGLGGEGHSGAIGGVGEQVAP 290
           G  GL G G +G   GV     P
Sbjct: 448 GTAGLIGNGGNGGAAGVSGDGTP 470



 Score = 59.3 bits (142), Expect = 3e-13
 Identities = 55/162 (33%), Positives = 66/162 (40%), Gaps = 45/162 (27%)

Query: 114 GGTGTGQSRGAGGFGGVGQAGGKGWDGGP-IGNGQVGEQHGAGQL----------GSTDG 162
           GG G   S G G F   G +GG G +G   +GNG  G   G  Q+          G T G
Sbjct: 386 GGAGGAGSAGTGVFAPGGGSGGNGGNGALLVGNGGAGGSGGPTQIPSVAVPVTGAGGTGG 445

Query: 163 NPGVAGAAHGSGVSASHGSGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGR 222
           N G AG   G+G       G  GAAGV+  G  G G     GNG   G A  +G      
Sbjct: 446 NGGTAGLI-GNG-------GNGGAAGVSGDGTPGTG-----GNG---GYAQLIGDG---- 485

Query: 223 DIVGSVRGDGGVGMASGDGGLSTGAAGASAEGGLMPGFGGAP 264
                  GDGG G + G G       G+   GG + G  G+P
Sbjct: 486 -------GDGGPGDSGGPG-------GSGGTGGTLAGQNGSP 513



 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 9/61 (14%)

Query: 114 GGTGTGQSRGAGGFGGVGQAGGKGW-----DGGPIGNGQVGEQHGAGQLGST----DGNP 164
           G  G G + G  G G  G  G  G+     DGG  G G  G   G+G  G T    +G+P
Sbjct: 454 GNGGNGGAAGVSGDGTPGTGGNGGYAQLIGDGGDGGPGDSGGPGGSGGTGGTLAGQNGSP 513

Query: 165 G 165
           G
Sbjct: 514 G 514