Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter UspB from Mycobacterium tuberculosis H37Rv

Subject, 301 a.a., carbohydrate ABC transporter permease from Pectobacterium carotovorum WPP14

 Score =  142 bits (357), Expect = 1e-38
 Identities = 87/276 (31%), Positives = 145/276 (52%), Gaps = 7/276 (2%)

Query: 4   PSRVSNTAVYAVLTI-GAVITLSPFLLGLLTSFTSAHQFATGTPLQLPRPP-TLANYADI 61
           P RV+      +L I  A++ +SPF+  +L++  S   F       LPR P T  N+ D 
Sbjct: 28  PLRVTTRFTLPLLLICAALLWVSPFIW-MLSASVSTSSFGVDMASLLPRLPLTFDNFRDA 86

Query: 62  AD-AGFRRAAVVTALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTV 120
            D A + R    T +      L QL     A Y FA  +FRG+  LF++ +  +M+   V
Sbjct: 87  WDSADWLRLYTNTLIFAVGTFLVQLVTITTAGYIFAYHEFRGKTLLFYLLLIQMMIMPVV 146

Query: 121 TVVPLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHFRLIPDDLINAARLDGANTLD 180
            +VP  + + QLGL NT   +++P+ F S + +FL+R+ F  I  ++  AA ++G     
Sbjct: 147 MMVPNMMTLKQLGLLNTLTGVMMPY-FASAFGVFLMRQAFLNIAKEIEEAALMEGCRWWQ 205

Query: 181 VIVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATAD--LQSRFNDQ 238
           V+ HV+IP + P + A A +++   WN ++WPL++ +    +VLT+      + +    Q
Sbjct: 206 VVFHVLIPMTWPSILAFATVSITYHWNEYLWPLMVLNDPDKQVLTIGLVSFAMGAESGGQ 265

Query: 239 WTLVMAATTVAIVPLIALFVTFQRHIVASIVVSGLK 274
           W L+ A T +  +PL+  FV FQ+  ++S   SG+K
Sbjct: 266 WGLICAGTLLVCLPLMVAFVVFQKQFLSSFGFSGIK 301