Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter UspB from Mycobacterium tuberculosis H37Rv

Subject, 295 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola 67-19

 Score =  138 bits (348), Expect = 1e-37
 Identities = 87/274 (31%), Positives = 143/274 (52%), Gaps = 7/274 (2%)

Query: 6   RVSNTAVYAVLTI-GAVITLSPFLLGLLTSFTSAHQFATGTPLQLPR-PPTLANYADI-A 62
           R S  A  ++L I  A++ +SPF+  L ++F SA  F  G    LPR P TL+N+ D   
Sbjct: 24  RQSRRATLSLLMICAALLWISPFIWMLSSAF-SATTFGVGMASLLPRWPLTLSNFRDAWQ 82

Query: 63  DAGFRRAAVVTALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTVTV 122
            A +      T   T      QL     A Y FA  +FRG+  LF +++  LM+   V +
Sbjct: 83  SADWISLYANTIFFTFGTFFVQLLTITTAGYVFACHEFRGKQTLFLLFLVQLMIMPVVMM 142

Query: 123 VPLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHFRLIPDDLINAARLDGANTLDVI 182
           VP  + +   GL NT   +++P+ F S + +FL+R+ F  IP ++  AA ++G     V+
Sbjct: 143 VPNMMTLKAFGLLNTLTGVMMPY-FTSAFGVFLMRQAFLAIPKEIEEAALMEGCRWWQVL 201

Query: 183 VHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATAD--LQSRFNDQWT 240
             V++P S P + A A +++   WN ++WPL++ +    +VLTV      + +    QW 
Sbjct: 202 FRVLLPMSWPSILAFATVSITYHWNEYLWPLMMLNDPDKQVLTVGLVSFAMGAESGGQWG 261

Query: 241 LVMAATTVAIVPLIALFVTFQRHIVASIVVSGLK 274
           ++ A T +  +PL+  F+ FQ+  + S   SG+K
Sbjct: 262 MISAGTLMVCLPLMLAFIVFQKQFLRSFGFSGIK 295