Pairwise Alignments

Query, 1013 a.a., Probable helicase HelZ from Mycobacterium tuberculosis H37Rv

Subject, 1105 a.a., helicase SNF2/RAD54 family from Pseudomonas putida KT2440

 Score =  358 bits (920), Expect = e-103
 Identities = 224/499 (44%), Positives = 295/499 (59%), Gaps = 28/499 (5%)

Query: 523  LDPPDGFTATLRPYQQRGLAWLAFLSSLGLGSCLADDMGLGKTVQLLALETLESVQRHQD 582
            ++PP G  A+LRPYQQ+GL WL  L  +G G  L DDMGLGKT+Q LA   LE   +   
Sbjct: 625  VEPPTGLQASLRPYQQQGLNWLQALREMGTGGILGDDMGLGKTLQALAHLLLE---KQSG 681

Query: 583  RGVGPTLLLCPMSLVGNWPQEAARFAPNLRVYAHHG-GARLHGEALRDHLERTDLVVSTY 641
            R   P L + P SL+ NW  EA RFAP+LRV A HG G   H   L ++    DLV++TY
Sbjct: 682  RLSAPALAVMPTSLIPNWLDEAQRFAPDLRVLALHGPGRSKHFTKLHEY----DLVLTTY 737

Query: 642  TTATRDIDELAEYEWNRVVLDEAQAVKNSLSRAAKAVRRLRAAHRVALTGTPMENRLAEL 701
                RD+++L    W+ ++LDEAQ +K+S S+AA AV  L+A  R+ LTGTPMEN L EL
Sbjct: 738  ALMPRDLEQLRPQAWHVLILDEAQNIKSSSSKAALAVCELQAGQRLCLTGTPMENNLGEL 797

Query: 702  WSIMDFLNPGLLGSSERFRTRYAIPIERHGHTEPAERLRASTRPYILRRLKTDPAIIDDL 761
            WSI  FL PG LG  +RF   Y  PIERHG +E    L +  RP++LRR K    +  +L
Sbjct: 798  WSIFHFLMPGWLGDLKRFNQDYRNPIERHGDSERMAHLASRIRPFLLRRTKEQ--VATEL 855

Query: 762  PEKIEIKQYCQLTTEQASLYQAVVADMMEKIENTEGIERRGN------VLAAMAKLKQVC 815
            P K E+  + +L+  Q   Y+AV   M +K+   + I R G       +L A+ KL+QVC
Sbjct: 856  PAKTEMVHWVELSDAQRDTYEAVRVAMDQKVR--DEIARNGAARSQIVILDALLKLRQVC 913

Query: 816  NHPAQLLHDRSPVGRRS--GKVIRLEEILEEILAEGDRVLCFTQFTEFAELLVPHLAARF 873
                +L+      G ++  GK+  L E+LEE+L+EG RVL F+QFT    L+   L  R 
Sbjct: 914  -CDLRLVKGVESKGNQADKGKLGALLEMLEELLSEGRRVLLFSQFTSMLALIEQELEKRK 972

Query: 874  GRAARDIAYLHGGTPRKRRDEMVARFQSGDGPPIFLLSLKAGGTGLNLTAANHVVHLDRW 933
             R +     L  G  R RR   V +FQ G+   +FL+SLKAGG GLNLTAA+ V+H D W
Sbjct: 973  IRYS-----LLTGDTRDRRTP-VQQFQQGES-EVFLISLKAGGVGLNLTAADTVIHFDPW 1025

Query: 934  WNPAVENQATDRAFRIGQRRTVQVRKFICTGTLEEKIDEMIEEKKALADLVVTDGEGWLT 993
            WNPA ENQATDRA+RIGQ + V V K I  GT+EEKI  + +EK ALA  ++  G+    
Sbjct: 1026 WNPASENQATDRAYRIGQDKPVFVFKLITRGTVEEKIQLLQQEKAALAASLLDGGQAGQW 1085

Query: 994  ELSTRDLREVFALSEGAVG 1012
             L   ++  +FA   G  G
Sbjct: 1086 RLGDEEIEALFAPLPGKRG 1104