Pairwise Alignments

Query, 254 a.a., Conserved hypothetical protein from Mycobacterium tuberculosis H37Rv

Subject, 403 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

 Score =  137 bits (345), Expect = 3e-37
 Identities = 96/253 (37%), Positives = 131/253 (51%), Gaps = 16/253 (6%)

Query: 11  PRGIRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVVRVDGARVVL 70
           P G +LQKVL++ G+ SRR  E  I   R++V+G V   LG RVD   A+  +DG  +  
Sbjct: 14  PAGEKLQKVLARIGVGSRRDVEAWITQKRIKVNG-VEATLGQRVDLHDAIT-IDGKVIKR 71

Query: 71  DDSLV----YLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDADTEGLM 126
           +++       +  NKP G   T  D  GRP + D + +   G  +  ++GRLD +T GL+
Sbjct: 72  EEAAESVRRVIMYNKPDGEICTRDDPEGRPTVFDKMPKPKEG--RWINIGRLDINTTGLL 129

Query: 127 LLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDFAVVDA 186
           + T DGELA+RLMHPS+E+ + Y   V G V   +   L+AG+ L+DGPA    F  +  
Sbjct: 130 MFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVVLEDGPA---KFTDIKQ 186

Query: 187 IPGKTLVRVTLH----EGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRP-GSVRALR 241
            PG        H    EGRNR VRRL  + G  V  L R   G V L    P G  R + 
Sbjct: 187 APGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMGRWREMS 246

Query: 242 SNEIGQLYQAVGL 254
             E+  L   VGL
Sbjct: 247 QYEVDILSAEVGL 259