Pairwise Alignments

Query, 254 a.a., Conserved hypothetical protein from Mycobacterium tuberculosis H37Rv

Subject, 231 a.a., 16S rRNA pseudouridine(516) synthase RsuA from Pectobacterium carotovorum WPP14

 Score =  107 bits (268), Expect = 2e-28
 Identities = 83/236 (35%), Positives = 116/236 (49%), Gaps = 7/236 (2%)

Query: 14  IRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVVRVDGARVVLDDS 73
           +RL K LSQ    SR    + +   RV VDG VV     ++ P+  V   DG  +   + 
Sbjct: 1   MRLDKFLSQQLEISRSLVARELHAQRVTVDGEVVKSGAFKLSPEHNV-EFDGEPLKQQNG 59

Query: 74  LVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDADTEGLMLLTNDGE 133
             Y  LNKP+G +   +DD   P I  L    V    KL   GRLD DT GL+LLT+DG+
Sbjct: 60  PRYFMLNKPQG-YVCSTDDPDHPTI--LYFMDVPVAYKLHAAGRLDIDTTGLVLLTDDGQ 116

Query: 134 LAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDFAVVDAIPGKTLV 193
            +HR+  P H+  KTYL T+   +         AG++L +        A ++ I    +V
Sbjct: 117 WSHRITSPKHQCEKTYLVTLEQPLAEDTAAQFTAGVQLHNEKNLTKP-ATLEKIT-DYVV 174

Query: 194 RVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQ-RPGSVRALRSNEIGQL 248
           R+T+ EGR   V+R+ AA G  V  L R  IG + L  +  PG  R L + EI  +
Sbjct: 175 RLTISEGRYHQVKRMFAAVGNRVVELHRERIGGIYLDSELEPGEYRELSAEEIASV 230