Pairwise Alignments

Query, 904 a.a., Probable DNA polymerase I PolA from Mycobacterium tuberculosis H37Rv

Subject, 929 a.a., DNA polymerase I from Pectobacterium carotovorum WPP14

 Score =  499 bits (1284), Expect = e-145
 Identities = 336/951 (35%), Positives = 497/951 (52%), Gaps = 88/951 (9%)

Query: 13  AKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAF 72
           A+  L+L+DG+S  +RA++A P        G  T A+YG   ML +LL    P+H+A  F
Sbjct: 5   AENPLILVDGSSYLYRAYHAFPP--LTNSAGEATGAMYGVLNMLRSLLLQYQPSHVAVVF 62

Query: 73  DVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLA 132
           D   +TFR + +  YKA+R   P++   QI+   +++ A+G+ +L+  G EADD+I TLA
Sbjct: 63  DAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHKMVKAMGLPLLAVSGVEADDVIGTLA 122

Query: 133 TQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPD 192
            QAE  G  VL+ TGD+D  QLV+  VT++         +   P+ V +KYG+ P    D
Sbjct: 123 VQAEKAGKSVLISTGDKDMAQLVTPSVTLINTMNN----SILGPQEVCDKYGIPPELIID 178

Query: 193 FAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVR 252
           F AL GD SDN+PG+PGVGEKTA   +   G L SL  N+D + G      +     + +
Sbjct: 179 FLALMGDASDNIPGVPGVGEKTAQALLQGLGGLDSLYANLDKIAGLSFRGAKTMAPKLEQ 238

Query: 253 NRE-------LTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEF-RVLRD-------- 296
           ++E       L  +  DV L  + D L +   D D +HRLF   EF R L D        
Sbjct: 239 HKEVAYLSYQLATIKTDVELELSCDQLTVNELDVDELHRLFSRYEFKRWLSDVESGTWMQ 298

Query: 297 --RLFDTLAAAGGPEVDEGFDVRGGA----------LAPGTVRQWLAE------HAGDGR 338
             +    + A     V++  +               L   T+  W+         A D  
Sbjct: 299 GKKSSQPVQAVSSAVVEQVVEEDNAPTLSTDGYVTILDEKTLLDWIERLKQAEVFAFDTE 358

Query: 339 RAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHE 398
             GL  +  +L        ++ A   GE AYL  A      D   A    D  K  AL +
Sbjct: 359 TDGLDTLTANL------IGLSFAIKPGEAAYLPLA-----HDYLDAPEQLDRTKVLALFK 407

Query: 399 AKAAVHDLAGRGWTLE--------------GVTSDTALAAYLVRPGQRSFTLDDLSLRYL 444
                  L   G  L+              G+  DT L +Y++        +D L+ RYL
Sbjct: 408 PLLEDEKLLKIGQNLKFDKGVMQRYDIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYL 467

Query: 445 RR------ELRAETPQQ---QQLSLLDDDDTDAETIQTTILRARAVIDLADALDAELA-R 494
                   E+  +   Q    Q++L       AE    T+        L   L  +L   
Sbjct: 468 SHKTITFEEIAGKGKNQLTFNQIALEQAGPYAAEDADVTL-------HLHQKLWGKLQPH 520

Query: 495 IDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQIN 554
            D   +   +++P+  VL+++E  G+ +D  +L E   +   ++ +    AY + G++ N
Sbjct: 521 TDLCQVFQTIDMPLVPVLSRIERTGVLIDPAILAEHSKELTIRLAELETQAYELAGEEFN 580

Query: 555 LGSPKQLQVVLFDELGMPKTKRTKTGY-TTDADALQSLFDKTGHPFLQHLLAHRDVTRLK 613
           L S KQLQ +L+++  +P  K+T  G  +T+ + L  L    G+P  + +L +R + +LK
Sbjct: 581 LSSTKQLQGILYEKQKLPILKKTPKGAPSTNEEVLAEL--ALGYPLPKLILEYRGLAKLK 638

Query: 614 VTVDGLLQAVA--ADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGD 671
            T    L  +   A  R+HT+++Q + ATGRLSS++PNLQNIP+R D GRRIR AF+   
Sbjct: 639 STYTDKLPLMINPATKRVHTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPQ 698

Query: 672 GYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRR 731
           GY+ ++ ADYSQIE+RIMAHLSGD+GL+ AF  G D+H   AS  FG  +D+VT E RR 
Sbjct: 699 GYS-IVAADYSQIELRIMAHLSGDKGLLNAFANGLDIHRATASEVFGTALDKVTSEQRRS 757

Query: 732 VKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTS 791
            KA+++GL YG+SA+GLS+QL I   E+ + M+ YF R+ GV+DY+    ++A + GY S
Sbjct: 758 AKAINFGLIYGMSAFGLSRQLNIPRSESQKYMNLYFERYPGVQDYMERTRQQAAEHGYVS 817

Query: 792 TVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRM 851
           T+ GRR YLP++ S N   R+ AERAA+NAP+QG+AADIIK AMI +D  L +     +M
Sbjct: 818 TLDGRRLYLPDIHSRNAMARKGAERAAINAPMQGTAADIIKKAMIAIDDWLRKDTPKVKM 877

Query: 852 LLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAA 902
           ++QVHDEL+FEI     E   + ++  M G   L+VPL+V +G G +WD A
Sbjct: 878 IMQVHDELVFEIHDSVIEESISKIKVLMEGCMQLNVPLQVDIGTGMNWDEA 928