Pairwise Alignments

Query, 904 a.a., Probable DNA polymerase I PolA from Mycobacterium tuberculosis H37Rv

Subject, 944 a.a., DNA polymerase I from Dickeya dadantii 3937

 Score =  500 bits (1287), Expect = e-145
 Identities = 337/949 (35%), Positives = 501/949 (52%), Gaps = 69/949 (7%)

Query: 13  AKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAF 72
           A+  L+L+DG+S  +RA++A P        G  T A+YG   ML +LL+   P+H+A  F
Sbjct: 5   AENPLILVDGSSYLYRAYHAFPP--LTNGAGEPTGAMYGVLNMLRSLLQQYHPSHVAVVF 62

Query: 73  DVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLA 132
           D   +TFR   +  YK++R   PD+   QI+    ++ A+G+ +LS  G EADD+I TLA
Sbjct: 63  DAKGKTFRDDLFEHYKSHRPPMPDDLRAQIEPLHRMVKAMGLPLLSVSGVEADDVIGTLA 122

Query: 133 TQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPD 192
            QAE  G  VL+ TGD+D  QLV+ ++T++         T   P+ V  KYG+ P    D
Sbjct: 123 QQAERAGKPVLISTGDKDMAQLVTPNITLINTMNN----TILGPDEVCAKYGIPPSLIID 178

Query: 193 FAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVR 252
           F AL GD SDN+PG+PGVGEKTA   +   G L +L  ++D +        +   A + +
Sbjct: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYADLDKIASLTFRGAKTMAAKLEQ 238

Query: 253 NRELTDLV-------RDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAA 305
           N+EL  L         DV L    + L +   D   +H LF   EF+     + D     
Sbjct: 239 NKELAYLSYQLATIKTDVELELGCEQLTVNEPDVAELHELFTRYEFKRWLADVEDGKWLQ 298

Query: 306 GGPEVDEGFDVRGGALAPGTVRQWLAEHAGDG-----------------RRAGLTVVGTH 348
           GG +          A    T ++  +  + DG                 + A L    T 
Sbjct: 299 GGRKSQPAVPFVK-ATVEATPKEAASVLSQDGYVTILDEKVLLDWLERIKTAALFSFDTE 357

Query: 349 LPHGGDATA----MAVAAADGEGAYLD--------------TATLTP--------DDDAA 382
                  TA    +++A   GE AYL               ++T++P        D D  
Sbjct: 358 TDGLDTLTANLVGVSLAIKPGEAAYLPLGHITSRVYSSNIYSSTVSPATRMSTQLDRDRV 417

Query: 383 LAAW---LADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRSFTLDDL 439
           LA     L D    K     K     +A  G  L G+  DT L +Y++        +D L
Sbjct: 418 LALLKPLLEDDGIRKIGQNLKFDKGVMARYGIDLRGIAFDTMLESYVLDSVAGRHDMDSL 477

Query: 440 SLRYLRRELRA--ETPQQQQLSLLDDDDTDAETIQTTILRARAVIDLADALDAELA-RID 496
           S RYL+ +     E   + +  L  D    A+        A   + L + L A+L  + +
Sbjct: 478 SERYLQHKTITFEEIAGKGKNQLTFDQIPLAQASVYAAEDADVTLRLHETLWAKLEPQQE 537

Query: 497 STALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQINLG 556
              +   +++P+  VL+++E  G+ +D  +L E   +   ++ +    A+ + G+  NL 
Sbjct: 538 LRKVFQNIDMPLVPVLSRIERTGVLIDTTILAEHSRELTQRLAELEVQAHELAGEAFNLS 597

Query: 557 SPKQLQVVLFDELGMPKTKRTKTGY-TTDADALQSLFDKTGHPFLQHLLAHRDVTRLKVT 615
           SPKQL  +L+++L +P  K+T  G  +T+ + L  L     +P  + +L HR + +LK T
Sbjct: 598 SPKQLGAILYEKLQLPVIKKTPKGAPSTNEEVLAEL--ALDYPLPKLILEHRGLAKLKST 655

Query: 616 -VDGLLQAV-AADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDGY 673
             D L Q +     R+HT+++Q + ATGRLSS++PNLQNIP+R + GRRIR AF+  +GY
Sbjct: 656 YTDKLPQMINPLTRRVHTSYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPEGY 715

Query: 674 AELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRVK 733
             ++ ADYSQIE+RIMAHLS D GL+ AF+ G D+H   A+  FG+P+D VT E RR  K
Sbjct: 716 -RILAADYSQIELRIMAHLSRDAGLLRAFSHGLDIHRATAAEVFGLPLDRVTTEQRRSAK 774

Query: 734 AMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTV 793
           A+++GL YG+SA+GLS+QL I   EA + M+ YF R+ GV++Y+    ++A   GY ST+
Sbjct: 775 AINFGLIYGMSAFGLSRQLAIPRSEAQKYMNLYFERYPGVQEYMERTRQQAVDQGYVSTL 834

Query: 794 LGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRMLL 853
            GRR YLP++ S N   R+AAERAA+NAP+QG+AADIIK AMI +D  L + +    ML+
Sbjct: 835 DGRRLYLPDIHSRNVNSRKAAERAAINAPMQGTAADIIKKAMIAIDAWLRQEKPLVTMLM 894

Query: 854 QVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAA 902
           QVHDEL+FE+     +   A +R+ M G   LDVPL+V +G G +WD A
Sbjct: 895 QVHDELVFEVHHSVLDEASAKIRNLMEGCMQLDVPLQVDIGTGSNWDQA 943