Pairwise Alignments

Query, 518 a.a., Aminoglycosides/tetracycline-transport integral membrane protein from Mycobacterium tuberculosis H37Rv

Subject, 540 a.a., Possible multidrug resistance integral membrane efflux protein EmrB from Mycobacterium tuberculosis H37Rv

 Score =  126 bits (316), Expect = 2e-33
 Identities = 135/503 (26%), Positives = 218/503 (43%), Gaps = 71/503 (14%)

Query: 14  LAVLLGALDTYVVVTIMRDIMNSVGIPINQLHRITWIVTMYLLGYIAAMPLLGRASDRFG 73
           LA ++  +D  VV    R  +   G   +    + W +T Y+L     +P  G A+DRFG
Sbjct: 50  LASVMAHVDVTVVSVAQRTFVADFG---STQAVVAWTMTGYMLALATVIPTAGWAADRFG 106

Query: 74  RKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQGVASGALLPITLALGADLWSQR 133
            + +   S+  F +GS++ A+A    +  +LI  R +QG   G L P++ A+ A     +
Sbjct: 107 TRRLFMGSVLAFTLGSLLCAVA---PNILLLIIFRVVQGFGGGMLTPVSFAILAREAGPK 163

Query: 134 NRAGVLGGIGAAQELGSVLGPLYGIFIVWLLHDWRDVFWINVPLTAIAMVMIHFSLPSHD 193
               V+  +G    LG V GP+ G +++   + WR +F +N+P+   A+V+     P  D
Sbjct: 164 RLGRVMAVVGIPMLLGPVGGPILGGWLIG-AYGWRWIFLVNLPVGLSALVLAAIVFP-RD 221

Query: 194 RSTEPERVDLVGGLLLALALGLAVIGLYNPNPDG----KHVLPDYGAPLLVG-ALVAAVA 248
           R    E  D +G LLL+  L   + G+ +    G    +HVL     P + G AL+AA  
Sbjct: 222 RPAASENFDYMGLLLLSPGLATFLFGVSSSPARGTMADRHVL----IPAITGLALIAAFV 277

Query: 249 FFGWERFARTRLIDPAGVHFRPFLSALGASVAAGAALMVTLVDVELFG---------QGV 299
              W R     LID         +        A A + +T++ + LFG         Q V
Sbjct: 278 AHSWYR-TEHPLID---------MRLFQNRAVAQANMTMTVLSLGLFGSFLLLPSYLQQV 327

Query: 300 LQMDQAQAAGML----LWFLIALPIGAVTGGWIATRAGDRAVAFAGLLIAAYGYWLISHW 355
           L     Q+   +    L  ++A+PI     G +  R G   +   G+++ A G    + +
Sbjct: 328 LHQSPMQSGVHIIPQGLGAMLAMPI----AGAMMDRRGPAKIVLVGIMLIAAGLGTFA-F 382

Query: 356 PVDLLADRHNILGLFTVPAMHTDLVVAGLGLGLVIGPLSSATLRVVPSAQHGIASAAVVV 415
            V   AD         +P + T L + G+G+G  + PLS A ++ +   Q    S  + V
Sbjct: 383 GVARQAD--------YLPILPTGLAIMGMGMGCSMMPLSGAAVQTLAPHQIARGSTLISV 434

Query: 416 ARMTGMLIGVAALSAWGLYRFN--QIL-------------AGLSAAIPPNASLLERAAAI 460
            +  G  IG A +S    Y+FN  +I+             AG  AA+ P  S L R    
Sbjct: 435 NQQVGGSIGTALMSVLLTYQFNHSEIIATAKKVALTPESGAGRGAAVDP--SSLPRQTNF 492

Query: 461 GARYQQAFALMYGEIFTI-TAIV 482
            A+     +  Y  +F I TA+V
Sbjct: 493 AAQLLHDLSHAYAVVFVIATALV 515