Pairwise Alignments

Query, 563 a.a., Probable cold-shock DeaD-box protein A homolog DeaD (ATP-dependent RNA helicase dead homolog) from Mycobacterium tuberculosis H37Rv

Subject, 628 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Dickeya dianthicola ME23

 Score =  474 bits (1220), Expect = e-138
 Identities = 259/571 (45%), Positives = 364/571 (63%), Gaps = 28/571 (4%)

Query: 14  TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
           +FA L +   +L A+ ++GYE P+ IQA  IP L+ G DV+G+AQTG+GKTAAF++P+L+
Sbjct: 7   SFASLGLSAPILSALSELGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLN 66

Query: 74  KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
            I    K PQ LVL PTRELA+QVAEA   +  ++  +NV+ +YGG  Y VQL  LR+G 
Sbjct: 67  NIKAELKAPQLLVLAPTRELAVQVAEACNEFSKHMQGVNVVALYGGQRYDVQLRALRQGP 126

Query: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193
           Q+VVGTPGR++DHL+R TLDLS +  LVLDEADEML MGF +DVE I+++ P   Q ALF
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMAQIPAEHQTALF 186

Query: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQV--ARKMDALTRVLEVEPFE 251
           SATMP AIR+++ +++ DP EV  ++      +ISQSY  V   RK +AL R LE E F+
Sbjct: 187 SATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALIRFLEAEDFD 246

Query: 252 AMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAA 311
           A I+FVRTK AT E+AE L   G+++AA++GD+ QA RE+T+  L+DG +DIL+ATDVAA
Sbjct: 247 AAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAA 306

Query: 312 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQ 371
           RGLDVERIS V+NYDIP D+ESYVHRIGRTGRAGR+G AL+FV  RE  LL+ IE+  + 
Sbjct: 307 RGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKL 366

Query: 372 TLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADIAAALA 431
           T+ E  LP  E +  +R+A+FA  +   L    ++++R L+ +   + ++ +  +AAAL 
Sbjct: 367 TIPEVDLPNAELLGQRRLAQFAAKVQQQLESSDLDMYRALLGKLRPQEELDIETLAAALL 426

Query: 432 VQCRGGEAFLMAPDPPLSRRNRDQRRDRPQRPKRRPD----------------------- 468
              +G    ++ P+    RR R + R+R +R +RR D                       
Sbjct: 427 KMAQGERPLVLPPESAAERRPRREFRERDERFERRGDRNERAPRSSDERPARRERRDVGE 486

Query: 469 LTTYRVAVGKRHKIGPGAIVGAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATLKKL 528
           +  YR+ VG+   +    IVGAIANEG +     G I++    S +ELP  +P   L   
Sbjct: 487 MDLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGDLLSHF 546

Query: 529 AQTRISGVLIDLR---PYRPPDAARRHNGGK 556
            +TRI    ++++     +P +   R  GG+
Sbjct: 547 TRTRILNKPMNMQLMGDAQPHERRERREGGE 577