Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter SugB from Mycobacterium tuberculosis H37Rv

Subject, 276 a.a., ABC transporter for D-Mannitol and D-Sorbitol, permease component 1 (from data) from Pseudomonas simiae WCS417

 Score =  120 bits (301), Expect = 3e-32
 Identities = 82/272 (30%), Positives = 140/272 (51%), Gaps = 17/272 (6%)

Query: 11  VLDTLVVGYALLPVLWIFSLSLKPTSTVKDGKLIPS----TVTFDNYRGIFRGDLFSSAL 66
           +L TL    A+L    IF + L    T  D    P     T T +NY  I     + S  
Sbjct: 13  LLGTLAWAIAILIFFPIFWMVLTSFKTEIDAFATPPQFIFTPTLENYLHINERSNYFSYA 72

Query: 67  INSIGIGLITTVIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIER 126
            NS+ I    T + +++   AAY++A  E    +  +   L   M P + ++ P++ + +
Sbjct: 73  WNSVLISFSATALCLLISVPAAYSMAFYETQRTKGTLLWMLSTKMLPPVGVLMPIYLLAK 132

Query: 127 AIGLFDTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKVIVPL 186
           + GL DT   LI+ Y    LP+ ++ +  +F++IP D+ +AA++DGAT  Q   +V++P+
Sbjct: 133 SFGLLDTRIALIIIYTLINLPIVVWMVYTYFKDIPKDILEAARLDGATLWQEMVRVLLPI 192

Query: 187 AAPGLVTAAILVFIFAWNDLLLALSLTATKAA-ITAPVAIANFTGSSQFEEPTG----SI 241
           A  GL +  +L  I  WN+   +L+LT++ AA +TA +A         +  P G     +
Sbjct: 193 AKGGLASTVLLSLILCWNEAFWSLNLTSSSAAPLTALIA--------SYSSPEGLFWAKL 244

Query: 242 AAGAIVITIPIIVFVLIFQRRIVAGLTSGAVK 273
           +A + +   PI++F  I Q+++V GL+ GAVK
Sbjct: 245 SAVSTLACAPILIFGWISQKQLVRGLSFGAVK 276